Gene Pmob_0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_0504 
Symbol 
ID5758474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp547493 
End bp549208 
Gene Length1716 bp 
Protein Length571 aa 
Translation table11 
GC content32% 
IMG OID641301703 
Productinner-membrane translocator 
Protein accessionYP_001567561 
Protein GI160901980 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.92013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAACAG CATTATACAC CTTAATAATT GGTTCTCTCC TGGGTTTATT GTTTATTTCC 
AAGTCGTTTT TGTTGTTAGT ATTTTCTAAT ATAATAATCT TTGCAATCGC AGCTTTAGGT
TTAAATGTAA TATTTGGGTA CACAGGTCAG ATCTCTATCG GCCATGCTGC TTTTATGGCC
ATTGGAGCGT ATACAAGTGC TTTTTTTACA ATGAGTTTAA ATATGCCAAT ATTTGTAAAC
TTAATTTTTG TTATCCTTTT TTCTGCTTTG TTTGGTATGT TAATAGCGTT ACCAGCTATG
AGACTGAAAG GATTTTATTT AGCCATAGCA ACTATGGCAT TTGGGATAGC GGTACAAGAG
ATAATTGCCT CAATGGAGGT ATTTGGTGGA AGGACCGGAA TGAGGAACAT CCCTGCTTTT
TTTGATTCTG ATTTTTATAC CTATTTGTTG AATTTGTTTT TTTATAGTCT TTTGGTCTAT
ATAACAAGTT TAATTGTAAA ATCTCCTGCA GGGAAGAGAT TCAATATGGT GCGAGACAGT
GAATTGGCTG CCAGAGCGTT CGGGGTGAAA ATTGCTAAAG CAAAATTACA AGCCTTTATT
ATCAGTTCTA TATACAGCGG AATAGCAGGT TTTTTATATG CGCATACGCT AGGATATATA
TCTCCTGCAG ATTTTGGTTT GAACGTCTCT TTGAATCTTT TGGCAATGGT TATTGTAGGT
GGAGTTGCTT CTTTAAATGG AGGATTGATT GGTTCTGTTA TAATTACAGG AATGCCTTTT
TTATTTTCAC GAAGCAATTT TCCTATGACT ATAATAGTAG GGAGTTTATT AATAATATTT
GTTTTATTCT TCCCTCGTGG CCTTTCTTAT GGGTTGAAAA TGTTGTATTT TAGATATTTT
GAAATCCCTG TTATATGGAT TATAAAAAAA TTTTGGAAGA ATAAGAAAAA AGAGGGAAGT
TATATTAACA TTGATGGAGT AAAATTATAT TATGAAGTAA GTGGTGAAGG TAAACCCGTT
GTTATGATTC ATGGTAATTA TGCCTCTCAC AGATGGTTTG AGAAAGTGAA AAACATTGAA
GGTTTTAAGG TCTATACACC TGATTTGCCA AATTTTGGTT ATTCTGATTG GATGAAAGAA
ATTCAAATAG ATACTTATGC AGAATATACC AAAAAGTTTA TAGATCTTTT AGGGTTGAAT
AAGGTTGTTT TAGTTGGGCA TTCTTTGGGT GGAGCTGTAG CGATGTCGAT AGCTTTTAGA
TATCCAGAAA AAGTAGAAAA ATTAATACTT GTTGATTCCC CTTCTTTAAA GGGTTTGAAG
ACACCAGAAG AAAATTATTA TGTTCTAAAT TTGTTAAAAA ACAATAGAAC ACTTCTAAAG
AATTCTTTAA AGGCAATGGT CCCTTCATCA AGAGATAGAA AATTACTAAA CTGTCTAACT
AACGATGCTC TTTTGATGAA CCCAAAATGT TTTACTGAAA ATGCAAGGGC TTTGGAAAAT
TATAACTATG AAGAAATATC TAAAAATTAT ATTGGGGAAA TATTATTCAT TCTTGGGGAA
AAAGATACGT TGATAACTAA AAATATGGCT GATGAAGTCG TTCGAAGTAC AAATGGGAAA
TTAGAAATTA TTCCTGATGT TGGACATTCG ATTATAATAG AAGAACCAAA AGCATTTATA
GATATTTTTA AAAGTTTTAC ATTGGAGAAA AATTAA
 
Protein sequence
MKTALYTLII GSLLGLLFIS KSFLLLVFSN IIIFAIAALG LNVIFGYTGQ ISIGHAAFMA 
IGAYTSAFFT MSLNMPIFVN LIFVILFSAL FGMLIALPAM RLKGFYLAIA TMAFGIAVQE
IIASMEVFGG RTGMRNIPAF FDSDFYTYLL NLFFYSLLVY ITSLIVKSPA GKRFNMVRDS
ELAARAFGVK IAKAKLQAFI ISSIYSGIAG FLYAHTLGYI SPADFGLNVS LNLLAMVIVG
GVASLNGGLI GSVIITGMPF LFSRSNFPMT IIVGSLLIIF VLFFPRGLSY GLKMLYFRYF
EIPVIWIIKK FWKNKKKEGS YINIDGVKLY YEVSGEGKPV VMIHGNYASH RWFEKVKNIE
GFKVYTPDLP NFGYSDWMKE IQIDTYAEYT KKFIDLLGLN KVVLVGHSLG GAVAMSIAFR
YPEKVEKLIL VDSPSLKGLK TPEENYYVLN LLKNNRTLLK NSLKAMVPSS RDRKLLNCLT
NDALLMNPKC FTENARALEN YNYEEISKNY IGEILFILGE KDTLITKNMA DEVVRSTNGK
LEIIPDVGHS IIIEEPKAFI DIFKSFTLEK N