Gene Pmob_0277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_0277 
Symbol 
ID5758569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp294145 
End bp295287 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content31% 
IMG OID641301477 
ProductABC-2 type transporter 
Protein accessionYP_001567342 
Protein GI160901761 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TCAGAAATCT CACAAAGGCC TTTTTTGTTA ATTCTTCAAG AGAATTTGCT 
GTTCCTTTTT GGACTATAAT ATTTCCTACG TTATTTTTCG TTTTATTCGT GGGTATCTTT
GAAAATATTG GCACCTCGGA AAATTTGGAT TTGAAGGTTG GAATATATTA CGAAGAGCCT
TTGCAGGGAG TAATAAAAAC CACCTTCGAT GATGTCTTTT CTCCATCGGA TTCCAATGAT
ATCCCTTTTC AAGTAGTAGA GTATGATTCT TTTGAAAAAG GGCTTCAGAA TTTAAAAAAT
TCTGAAATAA GTGCTTTTGT AGTGTTCCCT GAAAACTTTA ATTTGCTGAA TCTGAAATTT
TTTATCGAAA CCACTGAGGT TCCTGATATA AAAGTTTATT ATACCAACGA TAGTGCTTCT
ATGTATGCAA AAGACATTTT TGAAGTATTT ATAGATGAAA TCAATATAAT GATGTATACA
AGAGGGGAAG AAGTAAAACT AACTGTTAAT GAAGAGATTA TAGGGATAAA ACAATCAGAA
CCTTATAGAT ACAGAGATTT CCTATTTCCT GCCATTATTT TGATGTCTGT TTTGACAGTA
GCTGTATTTA ATATGCCTTT TGATTTTTCA TATTACGTTG AAAAAGGGGT TTTTAAAAAA
CTAAACTCTA CTCCTATAAA AGGGAACGAA TATTTTTTTA GTTTTTTACT TTCACATCTC
ATTTTACTGT TAATTTCTTT GATAGTTTTA TACATTGAGG CTTACCTTTT TGATGTTAGT
TCATATATAT ATAAACCAGG GTTTATAGCT TACAGTGGTT TTTCAATCCT GGTAATACTG
AGTGTTGGCC TTCTTCTTTC TTCATTCTAT AAAAATATGG GATCCGCCGA AGCGATTTCT
CAGGTCATAT ATCAAGCGAC CATTTTTTTA AGCGGATTTT ATTTTGAAGT TACTAATACA
CCTTGGTTTA TAAGATGGTA CGTTTATTTT AACCCTGCTA CTTATTTAGT AGATGGGTTG
AGAAAGTTGA TGACTGGTAA TGTTCTTGTC CCCGTTAATA TAATTGTTCC TGTTATCTGG
ATGATGGCAT CTATCTTAAT CTTTTCGATG AGTTATAAGG GGATGGTTTA CCGTGAAAAA
TAA
 
Protein sequence
MKKIRNLTKA FFVNSSREFA VPFWTIIFPT LFFVLFVGIF ENIGTSENLD LKVGIYYEEP 
LQGVIKTTFD DVFSPSDSND IPFQVVEYDS FEKGLQNLKN SEISAFVVFP ENFNLLNLKF
FIETTEVPDI KVYYTNDSAS MYAKDIFEVF IDEINIMMYT RGEEVKLTVN EEIIGIKQSE
PYRYRDFLFP AIILMSVLTV AVFNMPFDFS YYVEKGVFKK LNSTPIKGNE YFFSFLLSHL
ILLLISLIVL YIEAYLFDVS SYIYKPGFIA YSGFSILVIL SVGLLLSSFY KNMGSAEAIS
QVIYQATIFL SGFYFEVTNT PWFIRWYVYF NPATYLVDGL RKLMTGNVLV PVNIIVPVIW
MMASILIFSM SYKGMVYREK