Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4576 |
Symbol | |
ID | 5106887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 5021769 |
End bp | 5022380 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640505847 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_001190055 |
Protein GI | 146309590 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCTCG AACTCTGGCT CGTCTACTTC GTTGCCACCC TTGGCCTTGC GCTGACGCCC GGCCCCAACA GCCTGCTGGC GCTGACTCAC GGCGGGCTGT ATGGCGCACG CATGGCGCTA GCCACCATCC TCGGCGGCGT GGTCGGCTTC AGCACGCTGA TCGCCCTGGC CATGTTCGGC CTCAGTGCCC TGCTCAAGAC CGCGCCCAAC GCACTGCTGG CGCTGAAGTG GATCGGCGGC GCCTACCTGA TCTGGCTGGG CGTGCAGTTG TGGCGCTCGC CGCCGATGAA TCTTACGCTG GCCGACAGCG GCGCCCGCCC CAGCGCCAGC CGGTTGTTCC GCCAGGGCCT GCTGTCGGCG CTGTCGAACC CCAAGGTGAT CCTGTTCTAC GGCGCCTTCC TGCCGCAGTT CGTCGATCCG CAGCGCGGCC TGGCCGTGCA GTTCGTGGTA ATGGCCGCCA CCTTCGCCGT GGTCGAATTC CTCGTCGAGC TGCTGCTGGC GCTGCTGGCC TTCCGCGTGC GGCCCTGGCT GCAGCGCGGC GGCCGCGCCT TCAACCGCAG TTGCGGCGTG CTCTTCGTGC TGATCGGCGT GGCGCTGCCG CTGGCGCGCT AA
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Protein sequence | MALELWLVYF VATLGLALTP GPNSLLALTH GGLYGARMAL ATILGGVVGF STLIALAMFG LSALLKTAPN ALLALKWIGG AYLIWLGVQL WRSPPMNLTL ADSGARPSAS RLFRQGLLSA LSNPKVILFY GAFLPQFVDP QRGLAVQFVV MAATFAVVEF LVELLLALLA FRVRPWLQRG GRAFNRSCGV LFVLIGVALP LAR
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