Gene Pmen_4554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4554 
Symbol 
ID5107012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4993536 
End bp4994267 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content66% 
IMG OID640505825 
Producthypothetical protein 
Protein accessionYP_001190033 
Protein GI146309568 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCC GCCTTGCCCT GCTGCTCTGC CTCAGCCTGC ACCTCGTGCC CAGCCAGGCG 
CAGGAGGCCA TTCGCGTTGG CGTCGAGCTG CAACCCTATC AGCCCTATTC CGAGGTGGAG
AACGGCGAAT ACCGCGGCTA CGCCCGCGAG CTGCTGGATG CCTTCGCCGC CGAACAGGGC
TACCGCTTCG TCTATACGCC GCTGCCGGTC AGGCGCTTGC TTGGCGACTT TCTCGGCGGC
CGGGTCGATC TGAAGTTTCC CGACCACCCG CAATGGAACG CCGACCAGAA GGCCGGCCAC
CCGGTACGCT ACAGCCAGCC GGCGGCGCCC TATGTCGATG GCGTGCTGGT CAAGCCGCAA
TACCTTGGCC AGGGCAAGGC ACGCATCCGC CTGCTCGGCA CGCAGAACGG TTTCACCCCC
TGGCCCTACC TCGAGGACAT CCGCGCCCAG CGGATCAAGC TGATCCAGGC CAACCAGATC
GAATCGCTGC TGCTGATGGC CGCCAGCGAC CGGGTCGATG CGGTCTACCT CAACCCCCGC
GTGGTCACCC ATCAGCTGCG CCAGATGCGC CTGGCGCCGG ACACCCTGGT ATTCGACCCG
CAGCTCGCGC ACGTCGAGGA TCACTACTAC CTGTCGAGCA TCCACCACCC CGAGCTGATC
GAGGCCTTCG ACCGTTTCCT CGAGCGGCGC GCCGAACTGG TCGCGGCGAT CCGCTTACGT
CATGGCCTGT GA
 
Protein sequence
MKIRLALLLC LSLHLVPSQA QEAIRVGVEL QPYQPYSEVE NGEYRGYARE LLDAFAAEQG 
YRFVYTPLPV RRLLGDFLGG RVDLKFPDHP QWNADQKAGH PVRYSQPAAP YVDGVLVKPQ
YLGQGKARIR LLGTQNGFTP WPYLEDIRAQ RIKLIQANQI ESLLLMAASD RVDAVYLNPR
VVTHQLRQMR LAPDTLVFDP QLAHVEDHYY LSSIHHPELI EAFDRFLERR AELVAAIRLR
HGL