| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4485 |
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| Symbol | |
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| ID | 5107180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4916968 |
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| End bp | 4917834 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505756 |
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| Product | RpiR family transcriptional regulator |
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| Protein accession | YP_001189964 |
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| Protein GI | 146309499 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCTGT TGCAACATAT CGCCCAGTCG CGCCATCTGC TGCGCAAGTC CGAGCTCAAG
GTGGCCGACC ACGTGCTGCT CGATCCCGCA TCGGTGATGC ACAGCTCCAT GGCCGAACTG
GCGCACAGCG TCGGCATCAG CGAGCCGACC ATCGTGCGCT TCTGTCGCGC CATCGGTTGC
AGCGGCTTTC AGGACCTCAA GCTGAAACTG GCGCAGAGCC TGGCCGCCGG CGCCAGCTTC
GGCCAGTTCG CCATTCACGA GGACGACTCG GTCGCCGACT TCAGTTTGAA AATCTTCGAC
ACCACGCTGC ACACCCTGAT GGAGGTGCGC GAGAAGCTCG ACCCCGAGGC GCTGCAACGG
GCGATCGCCG CCTGCTCGCA GGCGCAGCGT GTGGAGTTTT ACGGTTTCGG CGCCTCCGGC
GCGGTAGCGG CCGATGCCCA GCACAAGTTC TTCCGCCTGT TGCTCAATGC CGCGGCCTAT
TCCGACCCGC ACATGCAGGC GATGAGTGCG GTGACCCTCA AGCCGAGCGA CGTGGCCATC
TGCATCTCGC AGTCGGGGCG CTCCAAGGAT CTGCTGATCA CCGCCAACCT GGTGCGCGAG
TCCGGCGCCA GCCTGATCAC CCTGTGTCCG AGCCAGACGC CCCTGGCCGA GCTGGCCACG
GTCAACCTGG CCATCGACGT GCAGGAAGAC ACCGAGATCT ACACCCCGCT GACTTCGCGC
ATCGCCCACC TCGTGGTGAT CGACGTGCTG GCCATGGGCG TGGCCATGGC GCGCGGGCCG
AGCCTGGTCA ACCACCTCAA GAGCGTCAAG CGCAGCCTGC GCAGCCTGCG CCTGTCGCCC
AAGTCGCTGC GCAATAGCGA GGATTGA
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| Protein sequence | MNLLQHIAQS RHLLRKSELK VADHVLLDPA SVMHSSMAEL AHSVGISEPT IVRFCRAIGC
SGFQDLKLKL AQSLAAGASF GQFAIHEDDS VADFSLKIFD TTLHTLMEVR EKLDPEALQR
AIAACSQAQR VEFYGFGASG AVAADAQHKF FRLLLNAAAY SDPHMQAMSA VTLKPSDVAI
CISQSGRSKD LLITANLVRE SGASLITLCP SQTPLAELAT VNLAIDVQED TEIYTPLTSR
IAHLVVIDVL AMGVAMARGP SLVNHLKSVK RSLRSLRLSP KSLRNSED
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