Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4438 |
Symbol | |
ID | 5107133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4863949 |
End bp | 4865904 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640505709 |
Product | hypothetical protein |
Protein accession | YP_001189917 |
Protein GI | 146309452 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATTCGCC TTGCCGCCTG GTGTTGCGCC GCGCTGCTGG CCCTGGCCGC AGGCGGCGCC CAGGCGCAGC TGCGTCTGAG CCTGGATGGG CAGACGCTGA CGTCTGCCGA GCGCCGGGCA AGCCAGGAGC TTCTGGACGA GGCCATGGCG GCGCTGCCGC CGCGCTTCGT CGAACAGCTG GATGTCGAAG TGCGAGTCCG CTGGCGAAGC GGCCTGCCGC CTGCGGTGTA CGGCCAGGTG GGCCGTCTGA GCGGCATCGA GCTGAATGCC GGGCTGCTGC CGGCGCTGGT CGACGGCTCG GCGGCGGAGA ACCGCACCGG CCGGCCGCAC GGAACCCAGC GCCGGGAGCT GCTCGCCACC CTGATCCACG AGCTGACCCA CCTCTACGAC CGCGCCCGCC TGTGGCCGGC CGCCCAACGC AGGCAGATCG GCCAGTGTCG GCAGCGTGCC GGCTCCACCG GCCAGATCGG CCTGCCGGAC GAATGCCGCG GTCAGGCCGA ACGCCGCTTC ACCCTCAGCG ACGACCCGCG CCTGCTCGAT CTCGCCGGCT GGCCGCAACG GGTCGGCCGG CGTGGCGCGC GTGACCTGAG CAACGGCCAG GTGGCGCGCA GCCCGGATCA TTACGAGCTG AGCAGCCCGC TGGAATTCGT CGCGGTCAAC CTCGAGTACT TCCTGCTTGA CCCCGCCTAC GCCTGCCGCC GCCCCTCGCT GGCGCGCTAC TTCCGCGAAC ATTTCGACTG GGCTCCGGCG AGCGAGCCCT GCGCGGACGG CCACGCCTAC CTCAATGCCG GGCGCGACTT TGCCCGCCAG CCGCTGGAGC GCATCGACCC CGAGCGGGTC TACGAGGTCG ACTACCTGCT GGCCGAGGCC AACGATGCCT GGATGAGCCG CTGGGGCCAC AGCATGCTGC GCCTGGTGGT CTGCGCGCCG GGCCGGCCGC GCGGGCCCGA CTGCCGTCTG GACCTCGACC AGCACCTGGT GCTGTCCTAC CGCGCGTTCG TTGGCGATCT GCAGTTGTCG AGCTGGGACG GCCTGACCGG CGTCTACCCG TCACGCCTGT TCGTCCTGCC GCTGGAGCAG GTGATCGACG AATACACCAA GGTCGAGCTG CGCAGCCTGG CCTCGGTTCC CATCAGGCTG AGCCGCGACG AACTGGAAGG CCTGGTCACC CGCGCCGTCG AACAGCACTG GAGCTATGAC GGCGACTACT ACTTCATCTC CAACAACTGC GCGGTGGAGA CCCTCAAGCT GCTGCGCAGC GGCACCGCTC ACCCGCAGCT GCAGGCACTC GACAGCATCC TGCCCAACGG CCTGCTGGAG CTGCTGGCCG CGCGCGGCCT GGCCGACACC TCGGTGCTGG ACGACCCGCG CGAGGCCCTG CGCCTGGGCT ACCGCTTCGA TTCCTTTCGC GAACGCTATC AGGCGATGTT CGGCGTGCTG CGTGAGCGCC TGCCGATCCC GCAGGAGAAT GTCGAAGCGT GGCTGGAACA GTCCGCGCAG GATCGCCGCC AGTGGTTCAC CCAGGCCGAC CTGCGCGCCA GCGCGGCCCT GCTGCTGCTT GAGCAGGCCG CCCTGCGTCG GCAACTGCTG CTGGCGCAGG ACGAGCTCAA GCGCCGCTAC CTGACCGGCC GCGCCGCCGG TGATCCCAGC CTGAACAAGG CCGGTGCGGC GCTGGAGCAG ATCCTTGCCG GCAGCGGCTT TCTCAGCCGG CCGGCCGAGC TGCTCGAGGG CGGCTATGGA CTGCCGCAGC GAGCCGAATG GGAGCGCCTG GAGGCCAGCA GCCGCGAGCG TCAGCAGCAG CTGCGGCAGC TCAGCGACGA GCTCGATGGC GAGGTACGCA ACCTGCTGCT GCCCGAGCGC CTGGCCGAGC TGGAAGCCAA CGAGTCCAAT CTGCTCGCCC TGGGCGAGCA CCTGCGCGCG CTGCACAAGG CCGGCGGCGG GCTGGAACTG CCCTAG
|
Protein sequence | MIRLAAWCCA ALLALAAGGA QAQLRLSLDG QTLTSAERRA SQELLDEAMA ALPPRFVEQL DVEVRVRWRS GLPPAVYGQV GRLSGIELNA GLLPALVDGS AAENRTGRPH GTQRRELLAT LIHELTHLYD RARLWPAAQR RQIGQCRQRA GSTGQIGLPD ECRGQAERRF TLSDDPRLLD LAGWPQRVGR RGARDLSNGQ VARSPDHYEL SSPLEFVAVN LEYFLLDPAY ACRRPSLARY FREHFDWAPA SEPCADGHAY LNAGRDFARQ PLERIDPERV YEVDYLLAEA NDAWMSRWGH SMLRLVVCAP GRPRGPDCRL DLDQHLVLSY RAFVGDLQLS SWDGLTGVYP SRLFVLPLEQ VIDEYTKVEL RSLASVPIRL SRDELEGLVT RAVEQHWSYD GDYYFISNNC AVETLKLLRS GTAHPQLQAL DSILPNGLLE LLAARGLADT SVLDDPREAL RLGYRFDSFR ERYQAMFGVL RERLPIPQEN VEAWLEQSAQ DRRQWFTQAD LRASAALLLL EQAALRRQLL LAQDELKRRY LTGRAAGDPS LNKAGAALEQ ILAGSGFLSR PAELLEGGYG LPQRAEWERL EASSRERQQQ LRQLSDELDG EVRNLLLPER LAELEANESN LLALGEHLRA LHKAGGGLEL P
|
| |