| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4419 |
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| Symbol | |
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| ID | 5107114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4840344 |
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| End bp | 4841753 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640505685 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001189898 |
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| Protein GI | 146309433 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.475055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGCACT CAACTCAAAC GGTAAGTTAC GCCTGCGACG AGCTGTTCGA TGAACAGCTG
GGGCAGCAAC ATATAGTCGT GGTCGGTCAG GCCGATGCCG CCAGCGAGCG TCTGCTGACC
GGCGGCCTGC AGCGTCGGGG CTTTCCTGTC CGTCGTTTCG CCAGTTGCCT GGAGCTGGAT
CCGGCCGCGC TGGAAGGTGC CAGCCTGGTG CTGGTGTTCG TCAGCAGCCT GGCCGGCAAT
ACGCTGTATG CCCAGGTGGG CGCCATTCTG CGTCAGGCCA GCCGCGTCGG CGTGGTGCCG
GTGGTCGAAT ACGCCGATCA GGAAAAAGCC GCGGCGCTGC TCGAGCTGGG CTGCGTCGAT
TATCTGCTGG CGCCGTTCAG CGAGGCCCAG CTCAGTGCAC TGCTGCGTCG CCAGGAGTCG
GCCAGCGCAG GCGAGGAGGG CTTCGTTTCC TGCTCTCAGG CCGGCCGCCG TCTGCTGGCC
ATGGCCCAGC GCGTGGCCAT GACCCGTGCC CCGATCCTCA TCACCGGCGA GACCGGCACC
GGCAAGGAGC TGATGGCGCG CTACATCCAC CGCTTCTCGG CGCAGGACGA TGCGCCCTTC
ATTGCCGTGA ACTGCGCGGC TATCCCTGAA CAGATGCTCG AATCCATCCT GTTCGGCCAC
GAGAAGGGCG CCTTTACCGG TGCGGTCAGC GCTCAGCCGG GCAAGTTCGA ACTGGCCAAC
GGCGGCACCC TGCTGCTCGA CGAAATCGGC GAGTTGCCGC TGGGGCTGCA GGCCAAGCTG
CTGCGGGTGC TGCAGGAGCA GCGCGTCGAG CGCCTGGGCG GGCGCCGTGA AATCGCTCTG
GATGTGCGCA TCATCGCCGC CACCAACCGT GACCTGCAGC AGGAAGTGGC CGAAGGCCGT
TTCCGCGCCG ACCTGATGTT CCGCCTCGAT GTGCTGCCGC TGCACATCAG CCCGCTGCGC
GAGCGCAAGG AAGACGTGCT GCCGCTGGCG CGCCGCTTCA TTCGCCAGTA CGCGCCGCAG
GACGCGCGCC ACGAACTGCT GACCGAAGAT GCCTGCCGCG CGCTGCTGGC CTATGACTGG
CCGGGCAACG TGCGCGAACT GGAGAACTGC CTGCAGCGTG CGCTGATTCT GCGCAATGGC
CTGTATATCC AGGCTCAGGA CCTGGGCCTG AGCGTGCCCG TGAGCAGCGC GCCGGAGTCG
ACGCCGCGCC TGCAGCCGCA ACTGCTGGAG GGCGGCAAGG CGGCCCTGCG CGCCAGTGGC
AAGTGGGCCG AGTACCAGCA CGTGATCGAC ACCATCCGCC GTTTCGGCGG GCACAAGACC
AAGGCCGCCG AAAGCCTCGG CATGACCCCG CGCGCGCTGC GCTACCGCCT CAATGCCATG
CGCGAGCAGG GCGTACAGAT TCCCGTCTAG
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| Protein sequence | MKHSTQTVSY ACDELFDEQL GQQHIVVVGQ ADAASERLLT GGLQRRGFPV RRFASCLELD
PAALEGASLV LVFVSSLAGN TLYAQVGAIL RQASRVGVVP VVEYADQEKA AALLELGCVD
YLLAPFSEAQ LSALLRRQES ASAGEEGFVS CSQAGRRLLA MAQRVAMTRA PILITGETGT
GKELMARYIH RFSAQDDAPF IAVNCAAIPE QMLESILFGH EKGAFTGAVS AQPGKFELAN
GGTLLLDEIG ELPLGLQAKL LRVLQEQRVE RLGGRREIAL DVRIIAATNR DLQQEVAEGR
FRADLMFRLD VLPLHISPLR ERKEDVLPLA RRFIRQYAPQ DARHELLTED ACRALLAYDW
PGNVRELENC LQRALILRNG LYIQAQDLGL SVPVSSAPES TPRLQPQLLE GGKAALRASG
KWAEYQHVID TIRRFGGHKT KAAESLGMTP RALRYRLNAM REQGVQIPV
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