| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4285 |
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| Symbol | |
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| ID | 5107059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4691023 |
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| End bp | 4691790 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640505551 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001189764 |
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| Protein GI | 146309299 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.0419531 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGT TTTTGCTGCT CATCGTGACG CTGGGCCTCA CGGCCTGCAC CACTCCGGCC
CGTATCGGCC TACCCGACTC CGATACGCTC GACGCCGGGC ACCACGCCGC GTTGACGCTT
GCCGATCTGC CGCCGGTGCA GGAGCGCATC CGCCCTGGCG ATACCTTGCG TATCGTCCGC
GACAGCGGCG AAACCCCGAC GATCTCAGCC TTTACCGCCA ACTCCATCTA CGAGCTGACG
CTGTATACCG TGCTCAATGA CGGCACCTTT TCCTACCCAT TCATCGGCAA GGTGCAGGCG
GGTGGCAAAA CGCCGGAGCA ACTGTCGGCC GAGCTCAAGG AGCGGCTGAC GCCCTTTTAC
CGCGAGCCCG GCGTAACCGT GAACATCAAC CAGGCGCCCG GCAATACCGT GTTCGTGGGC
GGCTCCGTGC GCAACCCTCA ATCCTATTCC ACCAATGTCG TCACCACGCT GGAGCAGGCG
ATCGTCGCAG CCGGTGGAGT GGAACCCAAC GCCGACAGCC GGCACGTCGC GCTGCTGCGA
TCCGACCCGG ACGGCCGCTA TCAGGCCTAT TTCGTGGATT ACAGCCAACT GCTGCAAGGC
GGCGCGCAGG GGCGTCAGGC CGTGGCGTTG CAGCGCGGTG ACGTGGTGTT CGTACCCAAG
TCCGGTGTGG GCAACCGCAT CGAGGGCGTC GACCTCTATC TCAATCAGTT AATCCCGTTC
GTGAAATCCA TTGGCATCGG TGCCAATTAC GATCTCCGCC GCAACTAG
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| Protein sequence | MKAFLLLIVT LGLTACTTPA RIGLPDSDTL DAGHHAALTL ADLPPVQERI RPGDTLRIVR
DSGETPTISA FTANSIYELT LYTVLNDGTF SYPFIGKVQA GGKTPEQLSA ELKERLTPFY
REPGVTVNIN QAPGNTVFVG GSVRNPQSYS TNVVTTLEQA IVAAGGVEPN ADSRHVALLR
SDPDGRYQAY FVDYSQLLQG GAQGRQAVAL QRGDVVFVPK SGVGNRIEGV DLYLNQLIPF
VKSIGIGANY DLRRN
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