Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4257 |
Symbol | |
ID | 5107031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4659929 |
End bp | 4661020 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640505521 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001189736 |
Protein GI | 146309271 |
COG category | [R] General function prediction only |
COG ID | [COG0579] Predicted dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000000201073 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCACGAAG TCGACACCCT GATCATTGGC GCCGGCGCCC TCGGTCTGGC CTGCGCCGCC CGCCTAGGCA AGCCCGATAC GCTGATTCTG GAGGCGGAGG GGCTGATCGG CAGCCACACC TCCAGCCGCA ACTCCGAAGT CATTCATGCC GGCCTCTATT ATCCGCCCGG CTCGCTCAAG GCCGAGCTGT GCCTGGAGGG CCGCGAACGC CTGTACGCCT GGTGCAACCA GCACGGCGTG GCGCACCGGC GGATCGGCAA GCTGCTGGTG GCGGTGCAGG AGAGCGAAAT CGGCAAGCTC GAGGCGCTGG CCGGCAACGC CGAGGCCTGT GGCGTAACGG ATCTGCAGCA GTTCGACCAG CCACGCCTGC ATGAGCTCGA ACCAGCCCTG CGCGGTGTAC GCGCCCTGCT CTCGCCGAGC ACCGGTATCA TCGACAGCCA TGCCTATCTG CAGTCACTGC TGGCGGTGGC GGAGAGCCGC GGCGCACAAC TGGTGCTGCA CAGCCGCGTC GAACGCCTGC AGCGCGACGG CGACGCCTGG ATCGCCAGCG GCCACAGTGC GGGCGAAGCC TTTACCCTGC GCGCACAACG GGTGATCAAC GCCGGCGGCC CCTTCGCCCA GCGCCTGGCC CGCACCATCG AAGGCCTGCC GGTGCCGCCG CTGCACCTGT GCCAGGGGCG CTACTTCAGC TACAGCGGGC GTTCGCCGTT CTCCCGGCTG ATCTATCCGA TGCCGGAGGC CAATACGGCC GGCCTGGGTA TCCATGCCAC GCTCGATCTG GCCGGGCAAC TGCGCTTCGG CCCGGACGTG CGCTGGCTGG AAACCCTCGA CTACCAGGTC GACGAGAAGC TGCGCGCGCC CTTCGCCGCT GCCATCGCCC GTTACTTCCC GGCAATCGAC GCTGCCCGCC TGCAACCCGG CTATGCCGGC GTGCGCGCCA AGCTCAGCGG GCCTGGGGAA CCGGCTGCCG ACTTCCTGAT CCAAACCCCT GCCGATCACC GCCTGCCCGG CCTGGTCAAC CTGTTCGGCA TCGAATCGCC AGGACTCACC GCCAGTCTGG CCATCGCCGA GCGGGTCGCC AGGGCTCTGT AA
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Protein sequence | MHEVDTLIIG AGALGLACAA RLGKPDTLIL EAEGLIGSHT SSRNSEVIHA GLYYPPGSLK AELCLEGRER LYAWCNQHGV AHRRIGKLLV AVQESEIGKL EALAGNAEAC GVTDLQQFDQ PRLHELEPAL RGVRALLSPS TGIIDSHAYL QSLLAVAESR GAQLVLHSRV ERLQRDGDAW IASGHSAGEA FTLRAQRVIN AGGPFAQRLA RTIEGLPVPP LHLCQGRYFS YSGRSPFSRL IYPMPEANTA GLGIHATLDL AGQLRFGPDV RWLETLDYQV DEKLRAPFAA AIARYFPAID AARLQPGYAG VRAKLSGPGE PAADFLIQTP ADHRLPGLVN LFGIESPGLT ASLAIAERVA RAL
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