| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4183 |
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| Symbol | |
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| ID | 5106607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4585647 |
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| End bp | 4586309 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640505447 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001189662 |
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| Protein GI | 146309197 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAC CCATTCGCCT GCTGCTGGCC GACGACCACG AGGTGACCCG CGCCGGTTTC
GCCGCGATGC TCGCCGACTG CCCGCAATTC AGCATCGTCG GCCAGGCGGT GGACGGCCGC
CAGGCGCTGG AACTCTGCCA GCGCCTGAAC CCGGACATCG CCATCCTCGA TATCCGCATG
CCGCAGCTCA ACGGCCTGGC TACCGCGCGC CTGCTGCGCG AACAGCAGCC GTCGATCAAG
GTGCTGCTGT TCACCATGTA CGACAGCCCC GACCACCTGG AAGCGGCGGT CAACGCCGGC
GCCGTCGGCT ATCTGCTCAA GGACGCCAGT CGCCAGGAAG TCATCGACGG CCTGCGTCAG
GTGGCGGCCG GCCAGTGCGC GCTCAACGGC ATGGTCAGCG CGCAGCTGCT GCGCCGCGTG
GTCCAGCGTA ACCAGGGCGG CGCCCCGGGC AGTGCGCTGA CGCCGCGCGA GCATCAGGTG
CTCGAGCTGA TCGCCGCCGG GTTCACCAAT CGCGAGATCG GCGAAGAGCT GGGCATCGCC
ACCGGCACGG CCAAGGCTCA CGTCGAACGG GTGATCGGCA AGCTGGGGGT CGCCGACCGC
ACCCAGGCCG CCGTGCAGGG CATTGCCCTG GGCCTGGTGG CGCCGCAGGA GCACAGGGCA
TGA
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| Protein sequence | MNEPIRLLLA DDHEVTRAGF AAMLADCPQF SIVGQAVDGR QALELCQRLN PDIAILDIRM
PQLNGLATAR LLREQQPSIK VLLFTMYDSP DHLEAAVNAG AVGYLLKDAS RQEVIDGLRQ
VAAGQCALNG MVSAQLLRRV VQRNQGGAPG SALTPREHQV LELIAAGFTN REIGEELGIA
TGTAKAHVER VIGKLGVADR TQAAVQGIAL GLVAPQEHRA
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