Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4182 |
Symbol | |
ID | 5106606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4584481 |
End bp | 4585650 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640505446 |
Product | GAF sensor signal transduction histidine kinase |
Protein accession | YP_001189661 |
Protein GI | 146309196 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCACA CCCCACCCGA CAGCGTGCTG GCCCTGCGCG CCGATTACCG CCAGGCGGAA AGCCGCGCCG CGCGCCTGCG CCTGCTGGTG GAGAGCGGCC GCGCCCTCAG CGCCTTGCCG GCCGCCGAAA GCGGTGCACT GGCCCTGCAG CGGGCCTGCA GCTTCTGCGC CATGGATGGC GGCGTGCTGC TGCTCAGGCC AGCCGATGGC AGCCCGAGCC GCAGCGCCGG TTTCGGCCCG GCCGCCTTGC AGCAGCAGCT CGCCACGCTG CCCTGGCCGG ACGCCGCCCA GGTGCTGGAA GCGCCGCTGG CGCAGGTTGC CCTGGCGCTC TGCCTACCCT TGCATGCGGC CTCGGGTGAG GTATTCGGTG CCCTGCTGCT GGGCAACGCC AGCGCCATGC GTCGCCCGGA CGAGGAGGAC CTCGAAGCCC TGCAGCTGCT CGCCACCCTG CTCGCCGCCC ACCTGCACAA CAGTCAGCTG CTGGAGGCGC TCAGCCTGCG CGAGCGGACC ATGTCCGAGC TGGTGCACCG GCAGATGAGC GCCCAGGAAG AGGAACGCGC ACGGGTTGCC TACGACCTGC ACGACGGCCT GGCGCAGACC CTGGCCGGGC TGCACCAGCG TCTGCAGGGC TTCGCCCAGC ATCGCCAGCT CAATGACGAG CTGCGCGCCG CTCTGGCGCC CATCCTGCAA CTGGCGCAAC GCAGCATGGG CGAGACGCGC CAGGCCATCA GCGGTCTGCG TCCGACCCTG CTCGACGACT TCGGTCTGGC GCCGGCACTG GACCGCGAAC TCGACCGCCT GCGCAGCCAG GGTCGCCAGG TGCAATGGCG GCGCCGCGAC CCCCAGCGCC TGCGCCCGGC GGTGGAGATC GCCCTGTTTC GCATCGGCCA GGAGGCCATC AACAACATCT GCAAGCACAC CGTCGAGGGC GCGGTCAGCC TGGATCTGCA CCTCGCCGGC GAGACCGCCC ACCTGCAGAT AGAGGATCGC GGCCCCGGCT TCGCCGTCAT GCAGAAAACG CCAGCCACCG AACACGGCAT GGGCCTGGTG GCCATGCGCG AACGCTGCCG GCTGCTCGGC GGTCAGTTCG CCTGTCACAG CCAACCCGGC CGGGGCACCC GCGTGCTGGC CAGCATTCCA CGCGCCCTGC CGGATGAGGA AAACGCATGA
|
Protein sequence | MQHTPPDSVL ALRADYRQAE SRAARLRLLV ESGRALSALP AAESGALALQ RACSFCAMDG GVLLLRPADG SPSRSAGFGP AALQQQLATL PWPDAAQVLE APLAQVALAL CLPLHAASGE VFGALLLGNA SAMRRPDEED LEALQLLATL LAAHLHNSQL LEALSLRERT MSELVHRQMS AQEEERARVA YDLHDGLAQT LAGLHQRLQG FAQHRQLNDE LRAALAPILQ LAQRSMGETR QAISGLRPTL LDDFGLAPAL DRELDRLRSQ GRQVQWRRRD PQRLRPAVEI ALFRIGQEAI NNICKHTVEG AVSLDLHLAG ETAHLQIEDR GPGFAVMQKT PATEHGMGLV AMRERCRLLG GQFACHSQPG RGTRVLASIP RALPDEENA
|
| |