Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4108 |
Symbol | |
ID | 5105627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4503373 |
End bp | 4504794 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640505372 |
Product | N-acetylglucosamine-binding protein A |
Protein accession | YP_001189587 |
Protein GI | 146309122 |
COG category | [S] Function unknown |
COG ID | [COG3397] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAGC GCCAATGGAT TTGCGTGGCC AGCGCCTGCT TGCTGCTGGC CAGCACCAAC CTGTTCGCCC ACGGCTATAT CAAGCAACCT GAAGCACGCG GCTACCTGTG CAAGCTGGGT GAAAACAGCG GATGCGGTGC AGTGCAATGG GAACCGCAAA GCCTGGAAGG CTACTCCGGC TTCCCGCAAA GTGGCCCCGC CGATGGCCAG ATCGCCAGCG CCGGGCTGGC ACAATTCGCC CCCCTCAATG AACAGACCGT CAGCCGCTGG GCCAAACGCC CCATTCAGGC GGGACCGACG AACTTCACCT GGCGCTTCAC CGCCAACCAT GTCACGCGCA ACTGGCGCTA CTACATCACC CGCCCCGACT GGCTGGCCAA TCAGCCGTTG AACCGCGCCG CGTTCGAGCT GGTACCGTTC TGCGTGGTCG ATGGCGGCAT GCGCCAGCCG CCGCAGGAAG CCACCCACAA CTGCGATGTA CCGCCGCGCG AAGGCTATCA GGTGATTCTG GGCGTCTGGG AAGTGGGCGA TACGCCGATG AGCTTCTACA ACGTGATCGA CGTGATGTTT GGCGATGTGA TGACACCGCC CGATCCGTCC GCCTGGCACG TCAAGGGCAT GCTCTACCCT TCGGTGGAAC TGCAAATCGG CGACCAGGCG CTGACCCGCG TATTCGATGC CGGCGGTGAG CGCAGTGACT TGCAGACTCG CCTGCAGATT GAAACCAGCG AGCAAGGCCA GCGCAACCAG TGGACCTACC TGCTGGCCAG CCGGATCAAC CAGCAACAGA GCCAGCTCAA AGCCGGTCAG CGCGGCAGCA ACGGCGCAAT TGAGCCGGTG TACGGCCAGA ACAGCCTGTT TGCTCGCGCC GACAGCGGCA TCCAGCGCAT CGAAGTGCAG ATCGACAAGG CCGCTGCCCC TGACCACGAA CTGTTGGTCG ATGGCCTGCA GCCCAGCTAT CGCATCCGCG GCAGCCAGCT GCGGCTTGAC TTCAACGTCA CCGCCGTGGG GGCGCTGCAG ATCAGCAGCT ACCTCTACGA CCACGACGGC AATGCCAAAG GCTTTGCCGC CGCCGAGCTG ACCAACAGTA GCCAGCCCTT GAGCATAGAG GTCGACAACC CTGCGCCCGG CCATCACCAA CTGGTGATCA GCGCCAGAGT GGCCGGCAGC GAGGAGCTGT TTCAGAAAAC CTTCGACATG ATGTTCGTCG CAGACGACGA CAGCGCCAAC TACGACTTCA CCTTCCCTGA CGGCCTGCGC AGTTACACGG CCGGCACCCG GGTGCTGCAA CCCAAGACGG GACAGCTGTA TCAGTGTCGT CCCTTTCCGC AGAGTGGCTA CTGCACGCAG TGGTCAGCCG CCTCGACCCA GTTCGAGCCC GGCATCGGCA GCCATTGGCA GGACGCCTGG ATAGCTGACT GA
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Protein sequence | MNERQWICVA SACLLLASTN LFAHGYIKQP EARGYLCKLG ENSGCGAVQW EPQSLEGYSG FPQSGPADGQ IASAGLAQFA PLNEQTVSRW AKRPIQAGPT NFTWRFTANH VTRNWRYYIT RPDWLANQPL NRAAFELVPF CVVDGGMRQP PQEATHNCDV PPREGYQVIL GVWEVGDTPM SFYNVIDVMF GDVMTPPDPS AWHVKGMLYP SVELQIGDQA LTRVFDAGGE RSDLQTRLQI ETSEQGQRNQ WTYLLASRIN QQQSQLKAGQ RGSNGAIEPV YGQNSLFARA DSGIQRIEVQ IDKAAAPDHE LLVDGLQPSY RIRGSQLRLD FNVTAVGALQ ISSYLYDHDG NAKGFAAAEL TNSSQPLSIE VDNPAPGHHQ LVISARVAGS EELFQKTFDM MFVADDDSAN YDFTFPDGLR SYTAGTRVLQ PKTGQLYQCR PFPQSGYCTQ WSAASTQFEP GIGSHWQDAW IAD
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