Gene Pmen_3975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3975 
Symbol 
ID5110198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4355556 
End bp4355939 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content67% 
IMG OID640505238 
ProductHNH endonuclease 
Protein accessionYP_001189454 
Protein GI146308989 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0390575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCGC CGCGCCCTTG CTGCCATCCG GGCTGTAACC GGCTGGTGAG CAACGGCAGC 
TACTGCGCTA CGCATCAGCA GCTGGCTGAC CAGCGCCGCG CCGAGCAGCT CAAGGGCGCG
AACAGGCGCT ACAACCGCAA GCGGGATGAG TCGGACAAGT TCTACAGCAC GGCGGCCTGG
CGCCGCTTTC GTGAGTTCAT CCTGATCACT CGGCCGCTGT GCGTTGACTG CGAGGCCGCT
GGGCTGGTGC TTCCGGCCGT GGTGGTCGAC CACATCAAGC CCTACAAGGA ACGGCCTGAC
CTGGGCCTGG ATGAGGGCAA CGTGCGCGGG CTGTGCCGCG CCTGCGATAA CCGGCGCCGA
CACGACCGAT CCGGCCGCGA CTGA
 
Protein sequence
MHAPRPCCHP GCNRLVSNGS YCATHQQLAD QRRAEQLKGA NRRYNRKRDE SDKFYSTAAW 
RRFREFILIT RPLCVDCEAA GLVLPAVVVD HIKPYKERPD LGLDEGNVRG LCRACDNRRR
HDRSGRD