Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3768 |
Symbol | |
ID | 5105763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4156205 |
End bp | 4158181 |
Gene Length | 1977 bp |
Protein Length | 658 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640505023 |
Product | iron-hydroxamate transporter permease subunit |
Protein accession | YP_001189248 |
Protein GI | 146308783 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.150372 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCAG TTTCGGCGCC GTCACGCCAT GTCCTGACGC TGCTTGCGTT GTTGCCCCTG GCGCTGCTGC ACCTGTGGCT GGCGGCCGAC CTCGACCCGT TCGAACTCGG GTCCATGCTC GGCGCTGCGG AGCAGAGTTT CGAGCGCCTG CAACTGCAGC TGTCGGCGTT GCCGCGACTG AGCATGGCCC TGCTGGTGGG CGCTGCACTG GGGCTGTCCG GCAGCCTGTT GCAGCAGATC ACGCAGAATC GCCTGGTTTC CCCCATGACC ATTGGCGCCT CGTCCGGGGC CTGGCTCGGC CTGGTCCTGG CCACCTTGCT GGTGCCGGCC TTCGCCGCCA GCCATGGTCA GTGGGCGGCG CTCGGCGGAG CGCTGCTGGC GGTCGGCCTG GTACTGCTGA TCGCCGGGCG CAGCGGCATC GGCGGCCTGC CGCTGGTGCT CGGCGGCATG GCCATGAACC TGCTGCTCGG CGCGCTGGCT GCCGGGTTGG TGCTGATCAA CAACCAGTAC ACCCAGGGCT TGTTCGTCTG GGGTGCGGGG GACCTGGCGC AGATCGACTG GCACTGGGTG CAGTGGCTGT GGCCCAAGCT GCTGCTGGCC GTGCCGCTGC TGATCCTCGC GCCGCGGCCG TTGAGCCTGC TGCAGCTGGG TAGCGACGCC GCTCAGGCCC GTGGCCTGGC GCTGTGGCCG GTGATGCTGG TGCTGTTTCT GGCGGCGCTG TGGTTGTGCG CGGTGTCGAT CACCGCGGTT GGCCTGATCG GCTTCATCGG CCTGCTCACG CCCAATCTGG CGAAGATGCT GGGCGCCCGC ACGGCACGCG ACGAGCTGAG CTACAGCGTG CTGCTCGGCG CCTTGCTGCT GCTGGCCACC GATGCCCTGG CGCTGCTGGC CAACCAGCTC AGTGGCCAGC TGGTGCCCAG CGGCGCGGCG GCTGCGCTGA TCGGCGCACC GGTGCTGTTG TGGCTGGCGC GTCGGCACCT GGCAGCAGAG GATCCGCACG GCCTGCGCTT GCCGGCCGGC GCCGAACGTT TTGGCTGGCG CGGCGCCTTG TGGCTTGGGC TGCTGGCTGT GCTGGCCCTG GTGCTTGCCC TGTGTCTGGC GCGGGGCCTC GATGGCTGGC GTCTGCAATG GCCTTCGGCG CTGGTCTGGT CGCTGCGCTG GCCACGCGTG CTCACCGCCG CTTCGGCGGG CGCCGGGTTG GCGATTTCCG GTCTGCTGCT GCAGCGCCTG CTGCGCAACC CCCTGGCCAG CCCGGACATC CTCGGGCTGT CGGCCGGCGC CACGCTGGCG GTGATGCTGG CGCTGACCTG GTTCGGTGGC GCCTTGCTCG GTGCCGTCGC GCCGCTGGCG GCCTTCGTCG GCTGTCTCGC CGTACTGGCG CTGCTGATGC TGCTAGGCCG CCGTCACCAT TATTCGCCGG CGCTGATGGC GCTGCTGGGC ATTTCCCTCG GCGCGCTGCT CAACGCCGCC TTGCAGTTCG TGCTGGCCAA GGGCACGGGC GATTCGTTCG CGCTGCTGGG CTGGCTGGCC GGCTCCACCT ACCGCGCCAC GCCGGCGCAG GCGCTATGGC TGACGCTGGG CGTGCTGCTG CTCGGCGCGC TGGCGCTGCT GTTCCAGCGC GCGCTGACCT TGATCGGCAT CGGAGATGGC GTGGCCGCCA GCCGCGGCCT CGACGTGCCG CGACTGCGCC TGGCGCTGCT GGTGCTGGTG GCGCTGCTCT GTGCGCTGGT CACCAGCCTG CTCGGCCCGG TGGCATTCCT GGGCCTGCTG GCGCCGCATA TCGCGGTGAT GCTCGGCGCG CGTCGGGTGG CGCCGCAGCT GTCGCTCGCC GCCGCCCTGG GCGCGCTGCT GATGCTGCTG GCGGACTGGG CCGGGCGCAC GCTGATCTTC CCCTTGCAGA TTCCGGTGGG CATCGTCGCC TCGGTGCTGT GCGGCGGCTA TTTCGTGTTG CTGCTGATTC GCGGGAGGCT GGCATGA
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Protein sequence | MAAVSAPSRH VLTLLALLPL ALLHLWLAAD LDPFELGSML GAAEQSFERL QLQLSALPRL SMALLVGAAL GLSGSLLQQI TQNRLVSPMT IGASSGAWLG LVLATLLVPA FAASHGQWAA LGGALLAVGL VLLIAGRSGI GGLPLVLGGM AMNLLLGALA AGLVLINNQY TQGLFVWGAG DLAQIDWHWV QWLWPKLLLA VPLLILAPRP LSLLQLGSDA AQARGLALWP VMLVLFLAAL WLCAVSITAV GLIGFIGLLT PNLAKMLGAR TARDELSYSV LLGALLLLAT DALALLANQL SGQLVPSGAA AALIGAPVLL WLARRHLAAE DPHGLRLPAG AERFGWRGAL WLGLLAVLAL VLALCLARGL DGWRLQWPSA LVWSLRWPRV LTAASAGAGL AISGLLLQRL LRNPLASPDI LGLSAGATLA VMLALTWFGG ALLGAVAPLA AFVGCLAVLA LLMLLGRRHH YSPALMALLG ISLGALLNAA LQFVLAKGTG DSFALLGWLA GSTYRATPAQ ALWLTLGVLL LGALALLFQR ALTLIGIGDG VAASRGLDVP RLRLALLVLV ALLCALVTSL LGPVAFLGLL APHIAVMLGA RRVAPQLSLA AALGALLMLL ADWAGRTLIF PLQIPVGIVA SVLCGGYFVL LLIRGRLA
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