| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3726 |
|---|
| Symbol | |
|---|
| ID | 5105721 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 4112685 |
|---|
| End bp | 4113122 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640504981 |
|---|
| Product | putative PAS/PAC sensor protein |
|---|
| Protein accession | YP_001189206 |
|---|
| Protein GI | 146308741 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCGC AGATCGATAT CAAGGAGGTT CACTGGCTGC TCGACATCGT GCAGTGCATC
GACGTCGGCG TGCTGGTGCT CGACCGCCAG TACCGCGTCG AGGTGTGGAA CGCCTTCATG
GAAAACCACT CCGGGCTGGG GCCGGATCAG GTGCAGGGGC GCTCGCTGTT CGAGCTGTTC
CCGGACATCG ACCGTCCCTG GCTGGAGCGC AAGGTGGAAA GCGTGGTGCA ACTGGGCACC
CGCTCCTTCA GCCTGTGGCA GCAGCGCCCC TACCTGATGC GTTTCAAGAG CTACCAGCCG
ATCACCGGCC AGGCCGATTT CATGTACCAG AACGTCACCC TGCTGCCGCT GGCCGGCCAG
CCGGTGGAGC ATGTGTGTCT GGTGATCTAC GACATGACGG CCGCGGCCGT GGCGGCACTG
GCGCAATCTA CGAGTTGA
|
|---|
| Protein sequence | MPAQIDIKEV HWLLDIVQCI DVGVLVLDRQ YRVEVWNAFM ENHSGLGPDQ VQGRSLFELF
PDIDRPWLER KVESVVQLGT RSFSLWQQRP YLMRFKSYQP ITGQADFMYQ NVTLLPLAGQ
PVEHVCLVIY DMTAAAVAAL AQSTS
|
|---|
| |