Gene Pmen_3724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3724 
Symbol 
ID5105719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4110256 
End bp4111497 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content70% 
IMG OID640504979 
Producthypothetical protein 
Protein accessionYP_001189204 
Protein GI146308739 
COG category[R] General function prediction only 
COG ID[COG2081] Predicted flavoproteins 
TIGRFAM ID[TIGR00275] flavoprotein, HI0933 family 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACTG CCGCTCAGCC CAATGTTCAT CACGTCGCCA TCATCGGCGG CGGCCCGGCC 
GGGCTGATGG CTGCCGAGGT GCTGGCGCAA GGCGGCGTGC ATGTGGAGCT GTTCGACGCC
ATGCCCTCGG TGGGGCGCAA GTTCCTGCTG GCCGGCGTCG GCGGCATGAA CATCACCCAC
TCCGAGCCCA AGGACGCCTT TATCGGCCGT TATGGCGAAC GCCAGGCCGA GGTCGCGGCG
CTGCTGCGCG AGTTAGATGC CGATGCCCTG CGCGCCTGGA TTCATGGCCT GGGCATCGAC
ACCTTCGTCG GTACCTCCGG CCGCGTGTTC CCCACCGACA TGAAGGCTGC GCCGCTGCTG
CGCGCCTGGC TGCGCCGTCT GCGCGAACTG GGCGTGACCA TCCATACCCG CAGCCGCTGG
CTGGGCTGGA ACGATGACGG CAGCCTGCGT ATCGCCGGCA CGGACGGTGA ACGCGCACTG
GCCGCCGACG CCTGCCTGCT GGCCCTGGGC GGCGGCAGCT GGGCACGACT GGGCTCCGAC
GGCGCCTGGG TGCCGCTTTT GCAGGCGCGC GGCATCGAGG TGGCAGCGCT GAAGCCGAGC
AACTGCGGCT TCGAAGTGGC TGGCTGGAGC GACTATCTCA GGGAGAAATT CGCCGGGGCG
CCGCTGAAGA ACGTCGCCTT GAGCCTGCCC GGCCAGGCCG CTCGCGTCGG TGAATTCGTG
CTGACCGCAG GCGGCATCGA AGGCAGCCTG GTGTACGCCT TCTCCGCCGA CATCCGCCGC
GCCATCGAGG CCGACGGCCA GGCCCTGACC CACCTCGACC TGCTGCCACA GATGCCGCTG
GCCAAACTGC AGCAGGCGCT GGGCAAACCG CGCGGCAAGC ATTCCATGGC CAAGCACCTG
CACCGCCAGG CCGGCCTCGA CGGCGTGAAA GCCGCCCTGC TGCGCGAGCT CGCCCCCGCC
GAGGCCTTCA CTGATCCGGC CGCGCTGGCT CCATGGATCA AGGCGCTGCC CATCACCCTG
CTGCGCACCC GCCCGCTGGA CGAGGCGATC AGCAGCGCCG GCGGCGTGCC CTTCGAGGCT
GTGGATGACG GCCTGATGCT CAAGGCCCTG CCCGGCGTGT TCTGCGCCGG CGAGATGCTC
GACTGGGAAG CGCCCACCGG CGGTTACCTG CTCACCGCCT GCTTCGCCAG CGGGCAGATG
GCGGCGCAGG GCGTTCTGCG CTGGCTGCAG CACCTGGCGT AG
 
Protein sequence
MTTAAQPNVH HVAIIGGGPA GLMAAEVLAQ GGVHVELFDA MPSVGRKFLL AGVGGMNITH 
SEPKDAFIGR YGERQAEVAA LLRELDADAL RAWIHGLGID TFVGTSGRVF PTDMKAAPLL
RAWLRRLREL GVTIHTRSRW LGWNDDGSLR IAGTDGERAL AADACLLALG GGSWARLGSD
GAWVPLLQAR GIEVAALKPS NCGFEVAGWS DYLREKFAGA PLKNVALSLP GQAARVGEFV
LTAGGIEGSL VYAFSADIRR AIEADGQALT HLDLLPQMPL AKLQQALGKP RGKHSMAKHL
HRQAGLDGVK AALLRELAPA EAFTDPAALA PWIKALPITL LRTRPLDEAI SSAGGVPFEA
VDDGLMLKAL PGVFCAGEML DWEAPTGGYL LTACFASGQM AAQGVLRWLQ HLA