| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3656 |
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| Symbol | |
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| ID | 5110117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4037724 |
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| End bp | 4038395 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640504911 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001189136 |
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| Protein GI | 146308671 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAGC TGACCGAGCG CGGGGCGATA CGCGCGGTGT TCGAGGACCT CGGCGGTTAC
GGCGCGCTGG CCCCACAGCA GGGTAGCGGC AGCGAGGGCC CGCTGGTCGG GCATCTGCAG
CGCACCAACA TCCAGCTGGC GGCCATCGGC GTGTTCGCCC GCAAGGGCCT GGAGCAGGTC
ACGGTGAACG ATCTGCTGGA GGCGGCGCAG GTATCGCGGC GTACCTTCTA CAAGTACTTC
GCCAACAAGA TGGACGTGCT CGAGGGCATC TATCAGACCT CGGTGCAACT GCTGCTGGCG
CGGTTTCGCC AGATGCAGCA GGTAGCCGGC AGCCCGCAGG CCTGGCTGCG CGCCATGGTC
GGCCTGTTCT TCGACTACCA CTTGGCGATC GGACCGATCA TCCGATTGAT GCAGGAGGAG
GCGCTGCGAG CCGATTCGCC GCTGGCCGCG CACCGTCAGC GCGCCCATCA GGAGATGCTG
CGTCTGGTGG TGGAGCGGCT GGAGCCGGAG CTGACGCCGC GCGATCCGCT GGTGTATCAG
GCGCTGATCT GGGCGCTGGA AGCCGCCTCG CTCGACCTGC TCGGGCGCAG CGCCAGCCGC
GAACAGATCG AGCAGGCCAA GGCGGTACTC GGCGACCTGC TGATCGCCTC GCTGTGCCCA
GGCTCAACCT AG
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| Protein sequence | MDELTERGAI RAVFEDLGGY GALAPQQGSG SEGPLVGHLQ RTNIQLAAIG VFARKGLEQV
TVNDLLEAAQ VSRRTFYKYF ANKMDVLEGI YQTSVQLLLA RFRQMQQVAG SPQAWLRAMV
GLFFDYHLAI GPIIRLMQEE ALRADSPLAA HRQRAHQEML RLVVERLEPE LTPRDPLVYQ
ALIWALEAAS LDLLGRSASR EQIEQAKAVL GDLLIASLCP GST
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