Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3567 |
Symbol | |
ID | 5106114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 3934597 |
End bp | 3935742 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640504820 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001189047 |
Protein GI | 146308582 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.397516 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCATG CCGATTACCT GATCGTCGGC GCCGGTATCG CCGGGGCCTC CACCGGCTAC TTCCTCGCCG GCCAGGGCAA GACCATCGTC CTCGAGCGCG AGCGCCAGCC CGGCTACCAC AGCACCGGCC GCTCGGCGGC GCTGTACACC GTGGCCTACG GCACGCCGCA GGTGCGCGCC CTGACTGCCG CCAGCCGCGC CTTCTACGAC GCACCGCCGC CCGGCTTCGC CGAGCACCCG CTGCTCAGCC CGCGCGGCGA ACTGGTGGTG GACTTCAGCG GCGATGCCGC CGAGCTGCAG CGCCAGTTCC TTGAGGCCCG CGCCCAGGTG CCCGAGGCCC GTCTGCTCGA TGCCGACCAG GCCTGCGCGC TGGTGCCGGT GCTGCGCCGC GACAAGGTTC AGGGCGCCCT GTTCGACCCC AGCGCCGCCG ACATCGACAC CGATGCCCTG CACCAGGGCT ACCTGCGCGG CATTCGCCAG CAGGGCGGGG AGATTCACAA CGATCGCGAA GTGCTGCACA TCGCCCGTGA CGGCGATGCC TGGCTGGTCG ACTGCGGCGC CGAACAGTAC CGCGCGCCGG TGCTGGTCAA CGCCGCCGGT GCCTGGTGCG ACGAACTGGC CCGGCTGGCC GGGGTCGCCC CCATCGGCCT GGTGCCCAAG CGCCGCGCCG CCTTCACCTT CCACGGCCCG GAGGGCGTCG ACTGCCACGC CTGGCCCTGC GTGGTGGATC TGCACGAGGC CTTCTACTTC AAACCCGACG CCGGCCAACT GCTCGGCTCG CCGGCCAACG CCGACCCGGT GGCGCCGCAC GACGTGCAGC CGGAGGAGCT GGATATCGCC ATGGGCATCT ACCAGATCGA GGAGCACACC AGCCTCAACA TCCGCCGCCC GGCGCACACC TGGGCCGGGC TGCGCAGCTT CGTCGCCGAC GGCGACCTGG TGGCCGGCTA CGACGGCCGG GCCGAGGGCT TCTTCTGGGT CGCCGCCCAG GGCGGCTACG GCATCCAGAC CAGTGCGGCC ATGGGCCAGG CCAGCGCCGC GCTGATCCGC CGCCAGCCGC TGCCCGAGGC GCTGACCCGC TTCGGTCTCA GCGAAGCCAT GCTCAGTCCT GCGCGCCTAG GCAGCCCGGA TGCAGGCCGG GAATAA
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Protein sequence | MQHADYLIVG AGIAGASTGY FLAGQGKTIV LERERQPGYH STGRSAALYT VAYGTPQVRA LTAASRAFYD APPPGFAEHP LLSPRGELVV DFSGDAAELQ RQFLEARAQV PEARLLDADQ ACALVPVLRR DKVQGALFDP SAADIDTDAL HQGYLRGIRQ QGGEIHNDRE VLHIARDGDA WLVDCGAEQY RAPVLVNAAG AWCDELARLA GVAPIGLVPK RRAAFTFHGP EGVDCHAWPC VVDLHEAFYF KPDAGQLLGS PANADPVAPH DVQPEELDIA MGIYQIEEHT SLNIRRPAHT WAGLRSFVAD GDLVAGYDGR AEGFFWVAAQ GGYGIQTSAA MGQASAALIR RQPLPEALTR FGLSEAMLSP ARLGSPDAGR E
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