Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3546 |
Symbol | |
ID | 5106093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 3911021 |
End bp | 3912274 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640504799 |
Product | inner membrane protein YjeH |
Protein accession | YP_001189026 |
Protein GI | 146308561 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.156536 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCGAC TGAACAAGGA ATTGGGCCTG CTGCAGGGCA TCGCCCTGCT CAGCACCTCG CTGCTGGGCA CCGGCATCTT CGTGGTGCCG GCGCTGGCCG CCACCGCCGC CGGGGCGGCC TCGCTGTGGG CCTGGCTGCT GCTGATCGCC CTGGTGCTGC CGGTGGCCTT TACCTTCGCC CAGCTGGGCC GACGCTTTCC CCACGCCGGC GGCGCCCCGC ACCTGATCGG CCGCGCCTTC GGCCTGCGCC TGGAAGGTGT CAGCGCCCTG CTGTTTCTCG CCGTGCTGCC GGTCGGTCTG CCCGCCGCGC TGCACATCGC CAGCGGCTTC TGGCTGGCGC TGTTCGATCT CGACGCCACT GGCCTGCTGC TGATCCAGCT GGCCACGCTG GCCGCCATCC TTCTGCTCGG CCAGCGTCCG GCGCGTGCCT CCGGCGTGCT GCAGGGGGTC ATCGCCCTGG CCATCGTCGG CAGCGTGGCG CTGATCTGGT GGATCGGCGA TCTGCCGCGC GCCAGCCAGC CGCTGCTGCC GCCCATGACG GGCCAGTGGC ACTTGCTGCC GGCTGCGCTG GGGGTGATGT TCTGGTGCTT CGTCGGCATC GAGGCCTTCA CCCACCTGGG CGAGGAGTTC AGGCGCCCCG AGCGCGACTT CCCCCTGGCC CTGCTGCTCG GGGTGCTGCT GGCCGGCCTG GTGTACTGGG CCTGCTCGGT CGCGGTGCTG ACGTTCGCCA CCTATGGCGA TATCCAAACC GACGCCACCG CCCTGCCGCG GCTGTTCGAA GTGCTGCTGG GGGACAAGGC CCGTGTGCTG GTGGCGGTGC TTGGCTACCT GGCCTGCTTC GCCTCGATGA ACGTCTACAT TCAGGGCTTC GCCAGGCTGA TCTGGAGCCT CGCCGACGAA GGCCGCCTGC CGGCGCCGCT GGCGGTGCGC AATGGCCATG GCGTACCGGG GCGCGCCTTG CTCCTGGTGG TGATCAGTTG CGCCGTCTGC GCGCTGCTGA CCGGCGCGCT GACACTCTCG GTGGACGATC TGATCCGCTA CGCCAATGGC AACTTCGTGC TCATCTACCT GCTCAGCATG GCCGCAGGCA CGGTACTGCT GCGCGGCATC TGGCGCTGGC TGGCTGCGCT GGCGACGCTG CTGTGCGCGG CGGTGCTGGT CATGCTCGGT GGCGATGCGC TGTATGCCCT GGGCCTGCTC GGTCTGCTGC TGGCGCTGGA TCAGCTGCGG GTCAGGCACA AGGCTCTCAC CTAG
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Protein sequence | MSRLNKELGL LQGIALLSTS LLGTGIFVVP ALAATAAGAA SLWAWLLLIA LVLPVAFTFA QLGRRFPHAG GAPHLIGRAF GLRLEGVSAL LFLAVLPVGL PAALHIASGF WLALFDLDAT GLLLIQLATL AAILLLGQRP ARASGVLQGV IALAIVGSVA LIWWIGDLPR ASQPLLPPMT GQWHLLPAAL GVMFWCFVGI EAFTHLGEEF RRPERDFPLA LLLGVLLAGL VYWACSVAVL TFATYGDIQT DATALPRLFE VLLGDKARVL VAVLGYLACF ASMNVYIQGF ARLIWSLADE GRLPAPLAVR NGHGVPGRAL LLVVISCAVC ALLTGALTLS VDDLIRYANG NFVLIYLLSM AAGTVLLRGI WRWLAALATL LCAAVLVMLG GDALYALGLL GLLLALDQLR VRHKALT
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