Gene Pmen_3455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3455 
Symbol 
ID5105925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3810967 
End bp3811983 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content66% 
IMG OID640504709 
Producthypothetical protein 
Protein accessionYP_001188937 
Protein GI146308472 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGA CCTTCAAACC GCTGGAGAGC TACCGGGAAG ACTTCAGCTT CCGCAACAGC 
CCCGCCGCCA TCGCCCGTTT TCCTTTCCCC TTCCCGGAAG ACCAGTACAT GTACTCGGTC
AACCTGGAGC CGGCGGTGTC GCGCGATCCC GGCTCGGTGT TCGAACATCA ATTCGACGTG
GACGAGCACT ACGTGTCCGA GATGGCCGAG CGCGCCCGCG TGCTGGAACT CGACCCCGGC
CGTTGCCTGG TGATGCCGCA TATGGCCCAG GCCGCCTGGG ACACCCTGGC CATGCTGATG
GAGCACCTGG CCCGCGATTA CCCACAGCAC TTTCGCCTGA CGCGGCAAGG CGATGCCTGG
CACTGGCAGA ACCTGGCTCT GGGCATCGAC CAGCGCTTCA CTTTCGGCGA CCCGGCCAGC
CTGCCCTGCG AGCCGCTGGA GTACATCACC CGGCAGATGC AGGGCGACTT CGCGGTGCTC
GACCAGCGCG ACGGCGACCT GTTCATGGAC GCAGGCATGG TCACCTGCCC GGCCGACTGG
TCGCTGCGCT TCGACGCCGG CATGAGCTTC AAGCAGTGGC ATTCGCCGGT GCCGATGGCG
CACCAGATGG GCGTGTTCGA CCGCGCGCTG AAGTATTTGC TGAACATCCA GGTCGGTGCG
CCGGTACGCC GGCTGAACTG GACCCTGACC ATCAACCCGC GCCTGGACAC CTCGCCCGAG
ACCTACCACG AATGGGGCAA CGATCGCGGC AAGGTCACGC CGGACAACGT CGGCCGCCTG
GTGCACCTGC GCGTCGAGTT GCAACTGATG GCCCGCCTGC CGCGCTCCAA CGCGCTGCTG
TTCGGCATCC GCACCTACCT CATCAGCCTC GATGAACTGG TCAGCAATCC GGCCTGGGCC
CAACGCCTGC ACCGGGTGAT GCGCGACCTG CCCGATCCCA TCGCCGACTA CAAGGGCATC
ACCCGTTACC GCCAGACGCT GGTGGACTGG CTACGCCGGT TCGATCCCGA AGCCTGA
 
Protein sequence
MTLTFKPLES YREDFSFRNS PAAIARFPFP FPEDQYMYSV NLEPAVSRDP GSVFEHQFDV 
DEHYVSEMAE RARVLELDPG RCLVMPHMAQ AAWDTLAMLM EHLARDYPQH FRLTRQGDAW
HWQNLALGID QRFTFGDPAS LPCEPLEYIT RQMQGDFAVL DQRDGDLFMD AGMVTCPADW
SLRFDAGMSF KQWHSPVPMA HQMGVFDRAL KYLLNIQVGA PVRRLNWTLT INPRLDTSPE
TYHEWGNDRG KVTPDNVGRL VHLRVELQLM ARLPRSNALL FGIRTYLISL DELVSNPAWA
QRLHRVMRDL PDPIADYKGI TRYRQTLVDW LRRFDPEA