Gene Pmen_3440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3440 
Symbol 
ID5105910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3797817 
End bp3798302 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content64% 
IMG OID640504694 
Productflavin reductase domain-containing protein 
Protein accessionYP_001188922 
Protein GI146308457 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.540454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAC CCGGCATTTA TAAAGAAGTG ATGGGCTCCT TCCCGTCCGG CGTCACCGTG 
GTGACCACCC TGGACAGCGA AGGCGGCATC GTCGGCATCA CCGCCAGCGC CTTCAGCGCC
CTGTCGATCG ACCCGGCGCT GGTGCTGTTC TGCCCTAACT ACGCCTCTGA CACCTACCCG
ATCCTGCGCG ACAGCAAGCG CTTCGCCATC CACCTGCTAT GCGCCGACCA GCAGGCCGAA
GCCTACGCTT TCGCCGGCAA GGGCAAGGAC AAGGCACAGG GTATCGAATG GACGCTGAGC
GAACTTGGCA ACCCGCTGCT GAGCAAGGCG ACCGCTATCA TCGAGTGCGA ACTGTGGCGC
GAGTACGACG GTGGCGATCA CGCCATCATC GTCGGTGCGG TGCAGAACCT GATCCTGCCC
GAGCAGGAGG TGACGCCCAT GGTTTACCAC CGCGGCAAGC TCGGCGCCCT GCCCTCCATC
GCCTGA
 
Protein sequence
MIEPGIYKEV MGSFPSGVTV VTTLDSEGGI VGITASAFSA LSIDPALVLF CPNYASDTYP 
ILRDSKRFAI HLLCADQQAE AYAFAGKGKD KAQGIEWTLS ELGNPLLSKA TAIIECELWR
EYDGGDHAII VGAVQNLILP EQEVTPMVYH RGKLGALPSI A