| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3394 |
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| Symbol | |
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| ID | 5105866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3750607 |
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| End bp | 3751911 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640504650 |
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| Product | homoserine dehydrogenase |
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| Protein accession | YP_001188878 |
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| Protein GI | 146308413 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCCGG TCAAAGTGGG CATCTGTGGA TTGGGCACCG TCGGTGGCGG TACTTTGAAT
GTACTCAAGC GCAATGCCGA GGAGATTACT CGGCGCGCCG GTCGCGGCAT CGAGATTGCC
CAGATCGCCA TTCGCTCGCC CAAGCCGCAG TACGACATTA CCGGCATCGC CACGACCAAT
GACGTGTTCG CCGTCGCGAG CAATCCCGAG ATCGATATCG TCATCGAGCT GATCGGTGGC
TACACCTTGG CCCGCGATCT GGTGCTCAAG GCCATCGACA ACGGCAAGCA CGTGGTCACC
GCCAACAAGG CGCTGATCGC CGTGCACGGC AACGAGATCT TCGCCAAGGC GCGCGAGAAG
GGCGTGATCG TCGCCTTCGA GGCCGCCGTG GCCGGGGGTA TCCCGGTGAT CAAGGCGATC
CGCGAAGGCC TTGCGGCCAA CCGCATCAAC TGGCTGGCCG GCATCATCAA CGGCACCGGC
AACTTCATCC TGACCGAAAT GCGCGAGAAG GGGCGTGCCT TCGACGACGT GCTCAAGGAA
GCGCAGGCGC TGGGCTATGC CGAGGCCGAC CCGACCTTCG ACGTCGAGGG CATCGACGCC
GCGCACAAGC TGACCATCCT CGCCTCGATC GCCTTCGGCA TCCCGCTGCA GTTCGACAAG
GCCTACACCG AAGGCATCAC CCGCCTGACC ACGGCCGACG TCAACTATGC CGAGGCGCTG
GGCTACCGCA TCAAGCACCT GGGCGTGGCC CGGCGCACCG AGGCCGGTTT CGAGCTGCGC
GTGCACCCGA CGCTGATCCC GGCCGACCGC CTGATCGCCA ACGTCAACGG CGTGATGAAC
GCGGTGATGG TCAATGGCGA TGCCGTCGGC AGCACCCTGT ACTACGGCGC CGGCGCCGGC
ATGGAGCCGA CTGCCTCGGC GGTGGTGGCC GACCTGGTTG ACGTGGTGCG TGCGCTGACC
ACCGACCCCA CCAATCGCGT GCCGCACCTG GCTTTCCAGC CGGATTCGCT GTCCGATCAC
CCGATCCTGC CCATCGAGCA GTGCGAAAGC GCCTATTACC TGCGCATCCA GGCCAAGGAT
CATCCGGGCG TGCTGGCACA GGTGGCGAGC ATCCTCTCCG AACGCGGCAT CAACATCGAG
TCGATCATGC AGAAGGAGGC CGAGGAGCAG GACGGCCTGG TGCCGATGAT CCTGGTTACC
CATCGGGTGG TCGAGGCGCG TATCCTCGAT GCCATCTCCG CCATGGAAAC GCTGGATGGC
GTGGCTGCGC CCATCGTCCG TATCCGCGTG GAACAGCTCA ATTAA
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| Protein sequence | MKPVKVGICG LGTVGGGTLN VLKRNAEEIT RRAGRGIEIA QIAIRSPKPQ YDITGIATTN
DVFAVASNPE IDIVIELIGG YTLARDLVLK AIDNGKHVVT ANKALIAVHG NEIFAKAREK
GVIVAFEAAV AGGIPVIKAI REGLAANRIN WLAGIINGTG NFILTEMREK GRAFDDVLKE
AQALGYAEAD PTFDVEGIDA AHKLTILASI AFGIPLQFDK AYTEGITRLT TADVNYAEAL
GYRIKHLGVA RRTEAGFELR VHPTLIPADR LIANVNGVMN AVMVNGDAVG STLYYGAGAG
MEPTASAVVA DLVDVVRALT TDPTNRVPHL AFQPDSLSDH PILPIEQCES AYYLRIQAKD
HPGVLAQVAS ILSERGINIE SIMQKEAEEQ DGLVPMILVT HRVVEARILD AISAMETLDG
VAAPIVRIRV EQLN
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