| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3271 |
|---|
| Symbol | |
|---|
| ID | 5106778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 3621652 |
|---|
| End bp | 3622242 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640504528 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001188756 |
|---|
| Protein GI | 146308291 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.975235 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCG AATTGCTCCG GGGGCCGCAG ATAGCGCCCC ATATAGAGGA CCTGGCGCAG
CTACGAATCA CGGTCTTCCG CGAATTTCCC TACCTCTACG ATGGCAGCCT CGATTACGAG
GCCGAGTACC TGGGCACCTA TGTGCGCAGC GTCGGCAGCC TGTGCGTGCT GGTGCGTGAC
GAGGGCCGTG TGGTCGGCGC CTCCACGGCG CTGCCACTGG CTGACGAAAC CGAGGAGTTC
CAGCAGCCCT TTCTCGCCGC GGGCTGGGAC CCGGCGCGCA TCTTCTACTG CGCCGAGTCG
GTGGTGTTGC CGGCCTGGCG CGGACGTGGC CTGGGCGTGC GCTTCTTCGC CGAGCGCGAG
GCCCACGCGC GGCGCCTGGG CCATTTCGAC TGGTGCGCCT TCTGCGCCGT GCAGCGCCCG
GCCGACCATC CGCGGCGGCC CGCCGACTAT CAGCCACTGG ACGCCTTCTG GGCGCGCCGC
GGCTATCGCC ATCATCCCGA ATTGCACACC CGTTACCACT GGCGCGACTT GGACGAGGCC
GAGGAGTCGG CCAAGCCCAT GTCGTTCTGG CTGAAGGAGC TCACCCCATG A
|
|---|
| Protein sequence | MDIELLRGPQ IAPHIEDLAQ LRITVFREFP YLYDGSLDYE AEYLGTYVRS VGSLCVLVRD
EGRVVGASTA LPLADETEEF QQPFLAAGWD PARIFYCAES VVLPAWRGRG LGVRFFAERE
AHARRLGHFD WCAFCAVQRP ADHPRRPADY QPLDAFWARR GYRHHPELHT RYHWRDLDEA
EESAKPMSFW LKELTP
|
|---|
| |