| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3226 |
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| Symbol | |
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| ID | 5106733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3569164 |
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| End bp | 3570087 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640504483 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001188711 |
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| Protein GI | 146308246 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGGT TTCAGGAAAT GAAGGTGCTG CTGGCCGTGA CCGAGGCCGA GAGCTTCGCC
GGCGGCGCCA AGCTGCTGGG CATCTCGCCG CCCAGTGTGA CCCGCGCCGT CGCGGCGCTG
GAGGCGCGCC TCGGCACGCT GCTGCTGGCG CGCAATACCC GTAGCCTTCG CCTGACCGAA
GCCGGCCAGC GTTATGTCGA GGACTGCCGG CGCATTCTGC TGGAGCTGGA GGAAGCCGAG
GAGCTGGCTG CCGGTGGCAG CGTGCGCCCG CGTGGCCGGC TCACCGTGAC CGCGCCGGTG
ATGTTCGGCG AGCTGTTCCT GATTCCGCGC ATCACCCAGT ACCTCGACAG CTACCCGGAT
GTGGAGATCA ATGCGCTGCT GGTCGACCGC GTGGTGAACA TGATGGAGGA GGGCATCGAC
GTTGCCGTGC GCATCGGTTC GCTGCCCGAA GGTGATCACC AGGCGTTGCA GGTCGGGCAG
ATTCGCCCGG TGGTCTGCGC CGCGCCGGCC TTCCTCGACC GCGTCGGGCG GCCGCAGCAT
CCGCATGAGG TGCGCGATGC GCCCATCGTC ATGTCCAGCG CCAGCGGCCT GCTCAGCCAT
TGGCAGTTCG TCGGCGCCGA TGGCGTGTTC GGCTTCACCC CCACGCCGCG CTTCACCGTC
AGCTCCAACC AGGCGGCAAT CGGCGCCGCG CGCCTGGGCT GGGGCTATAC CCGCGTGCTG
TCCTACCAGG TGGCTGCCGC AGTGGCGCGC GGCGAGCTCG AGTTGGTGCT CGAAGCCTTC
GAACCGCCGG CCTTGCCGGT GCATATCATT CATCAGGGCG GTCGCCAGGT TTCGGCCAAG
GTGCGTACCT TCGTCGATCA CTGCGCCGCG AGCTTTCGTG CCGACCCGGC GCTGCGCGCG
GCTGGCGCAC CGTCCGCGCC ATGA
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| Protein sequence | MDRFQEMKVL LAVTEAESFA GGAKLLGISP PSVTRAVAAL EARLGTLLLA RNTRSLRLTE
AGQRYVEDCR RILLELEEAE ELAAGGSVRP RGRLTVTAPV MFGELFLIPR ITQYLDSYPD
VEINALLVDR VVNMMEEGID VAVRIGSLPE GDHQALQVGQ IRPVVCAAPA FLDRVGRPQH
PHEVRDAPIV MSSASGLLSH WQFVGADGVF GFTPTPRFTV SSNQAAIGAA RLGWGYTRVL
SYQVAAAVAR GELELVLEAF EPPALPVHII HQGGRQVSAK VRTFVDHCAA SFRADPALRA
AGAPSAP
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