| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3204 |
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| Symbol | |
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| ID | 5106533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3542972 |
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| End bp | 3544684 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640504461 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_001188689 |
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| Protein GI | 146308224 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.832965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0333314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATCA GCTACAGCTC AGGGGGCAAA CATCCGGACT TTCAGGACCT GAGTGAACAG
ATTCGCTTTC AAAGCACGGA AGGCAAGATC TGGTTCGGCG AGCAGCGCAT GTTGCTGATG
CAGGTGTCGG CGATGGCTAA TTTCCGCCGG GAGCTCATCA ATACCCTCGG CATCGAGCGC
GCCAAGGGAT TCTTCCTGCG ACTTGGCTAC CAATCCGGAC TCAAAGACGC CGAAATGGCC
CGCAAGCTGA GGCCGAACAG TCCGGAGCTG GAAATGTTCC TGGTTGGTCC GCAGTTGCAC
TCCTTGAAGG GCATGGTCAA TGCGAAGCCC ATTCAGCTGG AAGTGGATCA GGAAACCGGC
CATTTCTACT GCGAGCTTGA GTGGATTGAT TCCTTTGAGG TCGAGAGCTG CCTGACCGAG
GTGGGCCTGA TGGATGAGCC CGTCTGTTGG TCCTTGCTGG GCTACGCATG TGCGTACAGC
TCCTCGTTCA TGAAACGCGA AATCATCATC CAGGAAACCA GCTGTCGCGG GTGCGGCGAC
GAGCGCTGCA TCATCATCGG CAAACCCGCC GAGCAGTGGG AAAACGCCGC GGAATTCAGA
CGCTACTTTC AGGCCGATCC GATCATCGAG GAGCTGTATG AGCTGCAATC GCAGATCAGC
TCGTTGCGCA CGTGCCTGGA GAAGCAAGAG GGCCAGTACT ACGGCATAGG GCGCTCTCCC
GCCTACATGA CGGTTTGCAA GACGATCGAC AAGGCAGCCA AGGGCAAGAT CTCGGTCCTG
TTGCTCGGAG AAACCGGCGT CGGCAAGGAG GTAATCGCAC GCAGCGTCCA TCTTCGCAGC
GATCGCGCCG AGCAACCGTT TATCGCGGTG AACTGCGCTG CCATTCCGCA GGACTTGATC
GAGGCCGAGC TGTTCGGCGT CGAGAAAGGG GCGTTTACCG GTGCCAATCA GACCCGCCCG
GGGCGCTTCG AGCGCGCAAG CGGCGGGACC ATCTTTCTGG ACGAGGTGGT AGAACTGACC
CCAAGAGCGC AGGCGACCTT ACTAAGGGTG CTGCAGGAGG GGGAACTTGA ACGTGTGGGT
GGCTCTCGGA CCCACAAGGT CGATGTGCGA GTCATTGCTG CCACCAATGA GAGCCTCGTC
GATGCAGTCG AGGCGGGCCG GTTTCGCGCG GATCTTTATT ACCGCCTGAA TGTGTTTCCG
GTTCAGGTCC CCCCGCTGCG CGAGCGGCTT GAGGACCTGC CGCTGCTGGT CGAGCACTTT
CTAAGCAAGT TTCATCTGCA GTATCACAAG CGCACGCTAG GTCTGTCAGA CAAGGCTCTG
GCGCTGTGTC TCAGTTACGC TTGGCCGGGA AACATCCGCG AACTGGAGAA TGTGATCGAG
CGCGGCGTCA TCCTCACCGA CAGCAATGAA ACCATAGGGC AGGACGCTCT TTTTGCGGTT
TCCCCGAAGG CAGGCAATCT GCATGGTGAT CGTCTCAATG CCGATGGCGC GCTGGTTCAG
GCAGAAGATA GGGAAAGTGC AGCCGATTGG GTCACACAGA TCTTCGAACG ACACATTAGC
CTGGAAGCGG TAGAAGAGCA GCTGATGCGA CGGGCAATGG ACCTTGCTCA GCAAAACGTT
GCACAAGCCG CTCGAATCCT CGGGTTGACT CGACCTGCGT TGGCTTATCG TCTCAAGAAA
AGCGGAATCC TTGATGAGGA TGCGAGTGAG TAA
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| Protein sequence | MAISYSSGGK HPDFQDLSEQ IRFQSTEGKI WFGEQRMLLM QVSAMANFRR ELINTLGIER
AKGFFLRLGY QSGLKDAEMA RKLRPNSPEL EMFLVGPQLH SLKGMVNAKP IQLEVDQETG
HFYCELEWID SFEVESCLTE VGLMDEPVCW SLLGYACAYS SSFMKREIII QETSCRGCGD
ERCIIIGKPA EQWENAAEFR RYFQADPIIE ELYELQSQIS SLRTCLEKQE GQYYGIGRSP
AYMTVCKTID KAAKGKISVL LLGETGVGKE VIARSVHLRS DRAEQPFIAV NCAAIPQDLI
EAELFGVEKG AFTGANQTRP GRFERASGGT IFLDEVVELT PRAQATLLRV LQEGELERVG
GSRTHKVDVR VIAATNESLV DAVEAGRFRA DLYYRLNVFP VQVPPLRERL EDLPLLVEHF
LSKFHLQYHK RTLGLSDKAL ALCLSYAWPG NIRELENVIE RGVILTDSNE TIGQDALFAV
SPKAGNLHGD RLNADGALVQ AEDRESAADW VTQIFERHIS LEAVEEQLMR RAMDLAQQNV
AQAARILGLT RPALAYRLKK SGILDEDASE
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