Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2938 |
Symbol | |
ID | 5107656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3256561 |
End bp | 3258558 |
Gene Length | 1998 bp |
Protein Length | 665 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640504193 |
Product | hypothetical protein |
Protein accession | YP_001188425 |
Protein GI | 146307960 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.140535 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.820157 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTGTC CACGGAGTAA TGTCTCGATG GAAATTAAAT CCCGCAAGCC CGTTCTGCGT TTTGCACCGG CCAAGGCCGG CTATGCGTTG GCTGGCGTTC TGCCTTTGCT GGTTGCCGCC CAGGCCCAGG CGGTGGAGTT CAGCTTCGCC GATAACGAAA TCACCGGTTC CATCGATACT ACCGTTTCCT ACGGCCAGCT GTGGCGCGTG CAGGGGCAGG ACAAGACCAA CAACGATATC AACACCAACG ACGGCAACCG TAACTTCGAT ACCGGCCTGG TTTCCGAAGT GTTCAAGATC ACCACCGATC TGGAAGCCTC CTACCAGAAC TATGGTGTAT TCATCCGCGG TACCGCTTTC TATGACACCC AGATCATGGA CAAGCGCAAT GACTACTACG ACAACAACAC CCCGGCGCAG CCGAGCCAGA GCTTCCCGCG CGACAACAGC TTCACCTACG AGACCCGCCA CAAGGCCGGC CGCGATGCCC AGATCCTCGA CGCCTATGTC TATGGCAACT GGGACGTTGC CGATATGCCG GTTTCCGGTC GCCTGGGCAA GCAGGTGTTC AACTGGGGTG AGGGTCTGTT CTACCGCGGC GGGGTGAACA CCACCAACCC GGTGGATGCT GCCAAGTTCC GTTTGCCTGG CTCCGAGGTG AAGGAAGTAT TGGTGCCGGT AGAAGCGTTG AGCTTCAACA TCGGCTTGAC CGATAACCTG TCGATGGAGA CCTTCTACCA GTTCAACTGG AAGGAAACAG CGATCGACCC GGTTGGCACC TATTTCTCCG AGACCGATCT GTTTGCGGAT GGGGGGAATA CTGCTTACAG CACTAACCCG GCCCTCGGTT CCGCTGCGTT TCGCAACACT TACGCAAACC TGAGCGCTCT CGGAGTCGGT GGTTTGCAGG GCAGCAGCTA TCTCGATGGT AACGGGGTTT TCAAAGTCGC CACTATTGGT TCCGACTTAA ACGCTAAAAA CGACGGTCAG TTCGGCGTGG CTTTCCGTTA TATCGCAGAG GAGCTGAATT CAACTGAGTT TGGCTTCTAC TTCATCAACT ACCATGCGAA AGAACCGACT ATTTATGCCG ATCTGGGGGC TTATGAAGGC CTTGATCTCG ATGCGATCAC AGCTGCGGCC AGTGGCAATG CCATCCCCAA CTACTCGACC TTGCAGACTC TTGCAGGTCT CGGTAACACG ACCGCCCAGA CACTTCTCGG GCTCGTGAAT GGTGCGGCTA CCGTCGACGT AGCCAACCAG GTCAACGCAC GTCGTGAGTA CGTTGAAGAT ATCCGTATGT ACGGTATGAG CTTCAATACA ACTGTTGGCA ATGCCTCGGT GTTCGGTGAG CTGGCGTATC GCCCGAACCT GCCGGTTGGT ATTGCCGCTA CTAACGACCT GCTGGGTGAT CTGCTTTTGC AGGCACCGAA TCTCGCGTCG GGTGGTCTGG TCAATATCGG CGGTCAGCAA GTGGAGTTGG GCGACCAGAT TCACAACTAC ACCCGTGTCG AAGCGTTCAA CACTTCTCTG GGCACTATCT ACAACTTCGG CCCGAGCCTG GGCTTCGATT CGCTGTTCGG GATCGCCGAG CTGGCCTCCG AGCACCTGCG CGGTGATAGC CTGCAGTACA ACTCTCGCAA TGGCACTCGC TACTACGCTG GTCGTGGTAA CGGTTCCTAC ATTTCCGGCT ACGACCGCGA CGACCAGGTC AACAAGAACG CCTACGGCTA CACCCTGGTG CTGTCCGGTA CCTGGAACGA CGTCTACGCC GGCGTGAACC TGTCGCCGTT CGCCGTGTTC AAGCATGACT TCGAAGGCAA CTCGCACCAG ACCGGCAACT TCATCGAAGG ACGCAAGGCC TACACCCTGG GTATGCGCGC CAGCTACCTG AACAGCCTGG AAGCCGAGAT CCAGTACACC GAGTTCTACG GCGCTGGCCA GAACAACGGG GCACGTGATC GCGACAACAT CGGCGTCAAC GTCAAGTACT CGTTCTAA
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Protein sequence | MICPRSNVSM EIKSRKPVLR FAPAKAGYAL AGVLPLLVAA QAQAVEFSFA DNEITGSIDT TVSYGQLWRV QGQDKTNNDI NTNDGNRNFD TGLVSEVFKI TTDLEASYQN YGVFIRGTAF YDTQIMDKRN DYYDNNTPAQ PSQSFPRDNS FTYETRHKAG RDAQILDAYV YGNWDVADMP VSGRLGKQVF NWGEGLFYRG GVNTTNPVDA AKFRLPGSEV KEVLVPVEAL SFNIGLTDNL SMETFYQFNW KETAIDPVGT YFSETDLFAD GGNTAYSTNP ALGSAAFRNT YANLSALGVG GLQGSSYLDG NGVFKVATIG SDLNAKNDGQ FGVAFRYIAE ELNSTEFGFY FINYHAKEPT IYADLGAYEG LDLDAITAAA SGNAIPNYST LQTLAGLGNT TAQTLLGLVN GAATVDVANQ VNARREYVED IRMYGMSFNT TVGNASVFGE LAYRPNLPVG IAATNDLLGD LLLQAPNLAS GGLVNIGGQQ VELGDQIHNY TRVEAFNTSL GTIYNFGPSL GFDSLFGIAE LASEHLRGDS LQYNSRNGTR YYAGRGNGSY ISGYDRDDQV NKNAYGYTLV LSGTWNDVYA GVNLSPFAVF KHDFEGNSHQ TGNFIEGRKA YTLGMRASYL NSLEAEIQYT EFYGAGQNNG ARDRDNIGVN VKYSF
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