| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2888 |
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| Symbol | |
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| ID | 5107803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3197550 |
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| End bp | 3198341 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640504139 |
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| Product | phosphonate ABC transporter, inner membrane subunit |
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| Protein accession | YP_001188375 |
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| Protein GI | 146307910 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
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| TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.117638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACTT TGACCACCCA TACCCCGACC GTCGATAGCA AGCGCAGCTG GTTGCAGTTG
ATCGGCTGGG GCCTGTTCTT CGCCGTGCTC GCCTGGTCCT GGCGGGGGGC GGAAATGAAC
CCGCTGGCGC TGGTGCGCGA TGCCGGCAAC ATGGCCACCT TCGCCGCCGA CTTCTTCCCG
CCGGACTTCA GCAACTGGCG GCACTACCTC AAGGAAATGG TGGTCACCGT ACAGATCGCC
CTGTGGGGCA CGGTGCTGGC CATTCTCTGC GCCATTCCGC TGGGCATCCT CTGTTCCGAG
AACATCGTGC CCTGGTGGGT GTACCAGCCG GTACGCCGGG TGATGGATGC CTGCCGTTCG
ATCAACGAAA TGGTCTTCGC CATGCTCTTC GTCGTCGCGG TCGGGCTCGG TCCCTTCGCC
GGCGTGCTGG CGCTGTTCAT CAGCACCACG GGGGTGCTGG CCAAGCTGTT CGCCGAGGCG
GTCGAGGCCA TCGATCCCGG CCCGGTCGAG GGCGTGCGCG CCACCGGCGC CAGTGCCCTG
CAGGAGGTGA TCTTCGGCGT CATCCCGCAG GTGCTGCCGC TGTGGATTTC CTACTCGCTG
TACCGCTTCG AGTCCAACGT GCGCTCGGCC ACGGTGGTCG GCATGGTCGG CGCCGGTGGC
ATCGGGGTGA TTCTCTGGGA GGCGATTCGC GGCTTCCAGT TCGCCCAGAC CTGCGCCCTG
CTGATCGTGA TCATCCTGGT GGTGAGCGCC ATCGACATCC TGTCCCAGCG CCTGCGCAAG
CTCTTTATCT GA
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| Protein sequence | MTTLTTHTPT VDSKRSWLQL IGWGLFFAVL AWSWRGAEMN PLALVRDAGN MATFAADFFP
PDFSNWRHYL KEMVVTVQIA LWGTVLAILC AIPLGILCSE NIVPWWVYQP VRRVMDACRS
INEMVFAMLF VVAVGLGPFA GVLALFISTT GVLAKLFAEA VEAIDPGPVE GVRATGASAL
QEVIFGVIPQ VLPLWISYSL YRFESNVRSA TVVGMVGAGG IGVILWEAIR GFQFAQTCAL
LIVIILVVSA IDILSQRLRK LFI
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