| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2838 |
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| Symbol | |
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| ID | 5107753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3119441 |
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| End bp | 3120046 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640504088 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001188325 |
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| Protein GI | 146307860 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0560] Phosphoserine phosphatase |
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| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0446368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.11816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGACAG CCTACTGTTT CGATCTGGAT GGCACCCTGA CGCGTCAGGA GCTGTTGCCG
CTGATAGCGT CCTCGGTCGG ATTGGAGGAC GAGATCAGCG TTCTCACCCA GGCCACCATT
GACGGTCTGC TTCCTTTCGA CAAGTCCTTC AAGCTCCGCG TCCGTCTCTT GCGTGATGCC
CGGTTGGACT GGATTCATTC GGCCCTTGAA GAGCAGGTCG AATTCGACCC CGCTATTCTC
GATTTCATAA CGCGGCACCC ACAGCAATCA TTCGTGATTA CAGGGAACCT CGACCTCTGG
GTCCGGCCTG TGCTCGACAA GCTTGGCATT CAGAATTTTA CGTCACTGGC GCGACTGGGC
GAGGACGGTC AGCTGGAGGG GGTTGAGCAT ATCCTGCACA AGGGTGATGC CGTCAGCAGT
CTGCGTGGCC GCTTCGAACG CATCGTCGCT ATCGGTGAAG GCATGAACGA CGTGCCCATG
TTCGAGGCTG CCGACTGGCG TATTGCCTAC GGTGGGGTTC ACTCTCCCAA TAAGGTGCTG
GTCAAGCTCA GCGATTTTGT CACCTACGAT GGAAAGGCTT TATGTCGCCT CTTAAGCACG
TTGTGA
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| Protein sequence | MTTAYCFDLD GTLTRQELLP LIASSVGLED EISVLTQATI DGLLPFDKSF KLRVRLLRDA
RLDWIHSALE EQVEFDPAIL DFITRHPQQS FVITGNLDLW VRPVLDKLGI QNFTSLARLG
EDGQLEGVEH ILHKGDAVSS LRGRFERIVA IGEGMNDVPM FEAADWRIAY GGVHSPNKVL
VKLSDFVTYD GKALCRLLST L
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