Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2743 |
Symbol | |
ID | 5107894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 3012392 |
End bp | 3012949 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640503993 |
Product | Smr protein/MutS2 |
Protein accession | YP_001188230 |
Protein GI | 146307765 |
COG category | [S] Function unknown |
COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0170121 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.729725 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGACG ACGACATTTC CCTGTTCAAG GCCGAGCTGC GCGGCGTCAA GCCGATCAAG CACGACCGTG CCGACACCGG CAAACCCAAA CCCGACCGCA AGCAGTTCAC GACCTTGCGC CAGGCGGCAA CCATCAGCCA GGGCGAGACC AAGGTGGACG GCCTGTCCGA CCAGTTCGTC ATCGACGTCG GCGCCGAGGA CCCGCTCTAC TGGGCCGGCA ATGGCGTGCA GGAAGGGCAG ATGCGCAAGC TCAAGCTCGG CCAGATTCCC TTCGACGGCA GCCTCGACCT GCACGGCATG AGTGTCGAGA AAGCGCGTGA CACGCTGTGG GAGTTCCTCG CCGAAGCCGC CAGGCTAGAG GTGCGCTGCG TGCGCGTGAC CCATGGCAAG GCGGTGCGCA TGGACGGGCG CAAGCCTATG ATCAAGAGTC ATGTGAACAC CTGGCTGCGC CAGCACCCGC AAGTGCTGGG CTTCACCTCT TGTCAGGCCA AGCACGGTGG CACCGGCGCC GTGTATATCC TGCTCAAGCG CACCATGATG GATGGCCGCG ACGAGTAA
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Protein sequence | MQDDDISLFK AELRGVKPIK HDRADTGKPK PDRKQFTTLR QAATISQGET KVDGLSDQFV IDVGAEDPLY WAGNGVQEGQ MRKLKLGQIP FDGSLDLHGM SVEKARDTLW EFLAEAARLE VRCVRVTHGK AVRMDGRKPM IKSHVNTWLR QHPQVLGFTS CQAKHGGTGA VYILLKRTMM DGRDE
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