Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2689 |
Symbol | |
ID | 5107840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2947703 |
End bp | 2949541 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640503933 |
Product | hypothetical protein |
Protein accession | YP_001188176 |
Protein GI | 146307711 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.217964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTGACG GGCCAATTCC AATGAGCAAA ACCGTACGCA TCGGCTGCGC CTCCGCGTTC TGGGGCGATA CCTCCACGGC CGCCGACCAG CTGGTGCGCG GTGCCGAGCT GGATTACCTG GTGTTCGACT ACCTGGCCGA GATCACCATG TCGATCATGG CCGGCGCCCG TATGAAGAAG CCCGACGAGG GTTACGCCCG CGACTTCGTC GAGGTGCTCG CGCCGCTGCT GGGCGATATC GCCGCGAAGA AGATCCGCGT GATCAGCAAT GCCGGCGGGG TCAACCCGAT GGCCTGCGCC GCGGCCCTGA GCGCAGCGTG CGAGCAGGCC GGCGTACAGC TGAAGATTGC CGTGCTGCAC GGCGACAACC TGCAGCCCAA GCTCGGCGAA CTGGTCAAGT CCGGCACCCG CGAGATGTTC ACTGAAGCCC CGCTGCCGCC CTTCTGCGTC TCGGTCAACG CCTACCTGGG CGCACCGGGC ATCGTCGCCG CACTGGAACA AGGCGCCGAT ATCGTCATCA CCGGCCGCGT GGTCGACAGC GCCGTGGTCA GCGCTGCCCT GGTGCACGAG TTCGGCTGGG CCTGGAGCGA TTACGACAAG CTGGCCCAGG CAGCACTGGC CGGGCACATC ATCGAATGTG GCGCGCAGTG CACCGGTGGC AACTTCACCG ACTGGCGCGA CGTGCCGGAC TACGAACACA TCGGTTTCCC CATCGTCGAG GTCGAAGACG ATGGCCGTTT CGTCGTGACC AAGCCGGAGG GTTCCGGCGG CCTGGTCACG CCCTTTACCG TCGGCGAGCA GATGCTCTAC GAGATCGGCG ACCCGCGCGC CTATCTGCTG CCGGATGTGG TCTGCGATTT CACCCAGGTC GAGCTGACCC AGGTCGGTGC TGACCGCGTG CACCTGCAGG GCGCCCGTGG CCTGCCCCCC ACCGGGCAAT ACAAGGTCAG CGCCACCCAC CCCGACGGTT TTCGCTGCAC CGCCAGCTTC CTGCTCGCCG GTATCGAGGC GGTGGCCAAG GCCGAGCGCG TCAGCCAGGC GATCATCAGC AAGACCGAAG AGATGTTCGC CGAACGCGGC TGGGGGCCTT ATCAGGAGGT CAGCGTCGAG CTGCTCGGCA GCGAGGCCAC CTATGGCGCC CACGCTCGGC GCCAGGACAG CCGCGAGCTG GTGGTGAAGA TCGCCGTGCG TCATGCCAAG AAGGAGGCGC TGATCCTCTT CTCCCGCGAG ATTGCCCAGG CCGCCACCGG CATGGCACCG GGCCTGACCG GCATCGTCGG CGGCCGCCCC ACCGTCTACC CGGTGATCCG CCTGTTCAGC TTCCTGGTGG ACAAGAGCAC CTGCGCCCTG AGCGTCGAAA TCGACGGCGA GCGCCAGCCG GTCACCCTGC CCCAGGTCGA TGCCTTCGAC CCCGAGCGAC TGCACGCGCC GGCCGCCCTG CCCGTACCGA TGGGCGAAGC CGACGCTGCC GTGCCACTGA TCCGCCTGGC CGTGGCGCGC TCCGGCGACA AGGGCAACCA CAGCAACATC GGCGTGATGG CGAGAAAACC CGAGTACCTG GCGTGGATAG CCGCTGCGCT GACGCCCGAA GCCGTGGCCA ACTGGATGGC GCATATCCTG GACGCCGAGC AGGGTCGCGT CAGCCGCTGG TACCTGCCGG GCAGCCACAG CCTCAACTTC CTGCTGGAAA ACGCTTTGGG CGGTGGCGGC GTCGCCAGCC TGCGTATCGA CCCGCAGGGC AAGGCCTTCG CTCAGCAGTT GCTGGAATTT CCGGTGCCGG TGCCCAAGGC GCTGGCGCAA ACCTTGATTG GTGCGCACGG CGCACCCTAC ACCCCGTAG
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Protein sequence | MCDGPIPMSK TVRIGCASAF WGDTSTAADQ LVRGAELDYL VFDYLAEITM SIMAGARMKK PDEGYARDFV EVLAPLLGDI AAKKIRVISN AGGVNPMACA AALSAACEQA GVQLKIAVLH GDNLQPKLGE LVKSGTREMF TEAPLPPFCV SVNAYLGAPG IVAALEQGAD IVITGRVVDS AVVSAALVHE FGWAWSDYDK LAQAALAGHI IECGAQCTGG NFTDWRDVPD YEHIGFPIVE VEDDGRFVVT KPEGSGGLVT PFTVGEQMLY EIGDPRAYLL PDVVCDFTQV ELTQVGADRV HLQGARGLPP TGQYKVSATH PDGFRCTASF LLAGIEAVAK AERVSQAIIS KTEEMFAERG WGPYQEVSVE LLGSEATYGA HARRQDSREL VVKIAVRHAK KEALILFSRE IAQAATGMAP GLTGIVGGRP TVYPVIRLFS FLVDKSTCAL SVEIDGERQP VTLPQVDAFD PERLHAPAAL PVPMGEADAA VPLIRLAVAR SGDKGNHSNI GVMARKPEYL AWIAAALTPE AVANWMAHIL DAEQGRVSRW YLPGSHSLNF LLENALGGGG VASLRIDPQG KAFAQQLLEF PVPVPKALAQ TLIGAHGAPY TP
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