| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2617 |
|---|
| Symbol | |
|---|
| ID | 5107927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 2879079 |
|---|
| End bp | 2879897 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640503861 |
|---|
| Product | Ion transport protein |
|---|
| Protein accession | YP_001188105 |
|---|
| Protein GI | 146307640 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.017869 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGAAC TCGAATTGAA CCAATCCCCC TCCGACTGGC GCCAGCGCCT GGGACAGCTG
ATGGACGGCA CCGCCGTACA GCGCCTGGTC ACCCTGCTGA TCGTCGTCAA CGCGGCCATT
CTCGGCATGC AGACCTCGCC ATCGATCATG GCCGACTGGG GCCGGCCGCT GCTGATCCTC
GACAGCCTGA TCCTCGCCTG CTTCGTCATC GAGCTGGCGC TGCGCTTCAC CGCGCGCGGC
ATCGGTCTGC TGCGCGATCC CTGGGCGGTG TTCGACTGCC TGGTGGTGGG CATCGCCCTG
GTACCGGCCA GCGGTCCCTT CGCCGTACTG CGCGCCCTGC GCGTACTGCG GGTGCTGCGC
CTGGTGTCGA TCAACCCGAG CATGCGCAAG GTGGTGCAGG CGCTGCTCGC CTCGCTGCCG
GGCATGGGCA GCATCGTCAT GCTGATGGGG CTGGTGTTCT ATGTGGCCGC AGTGATGGCC
ACCCAGCTGT TCGGCCAGAG CTTCCCCGAG TGGTTCGGCA GCATCGGCGC CAGCCTCTAC
ACCCTGTTCC AGGTGATGAC CCTGGAAAGC TGGTCGATGG GCATCGTCCG CCCGGTGATG
GAGCAGCACC CGCTGGCCTG GATGTTCTTC GTGCCCTACA TCCTCATCGC CACCTTCATG
ATGCTCAACC TGTTCATCGC GGTGATCGTC AACGCCATGC AGAGCACCCA CGAGCCCAGC
ACCGAGGAGC TGGCGGCCGC CGCCCGCGAG CAGGCGATCC TCGACGAACT GCGCGCGCTG
CGCAGCGAAG TGGCAGAGCT GCGGCGCAAC GCTCCCTGA
|
|---|
| Protein sequence | MHELELNQSP SDWRQRLGQL MDGTAVQRLV TLLIVVNAAI LGMQTSPSIM ADWGRPLLIL
DSLILACFVI ELALRFTARG IGLLRDPWAV FDCLVVGIAL VPASGPFAVL RALRVLRVLR
LVSINPSMRK VVQALLASLP GMGSIVMLMG LVFYVAAVMA TQLFGQSFPE WFGSIGASLY
TLFQVMTLES WSMGIVRPVM EQHPLAWMFF VPYILIATFM MLNLFIAVIV NAMQSTHEPS
TEELAAAARE QAILDELRAL RSEVAELRRN AP
|
|---|
| |