| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2407 |
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| Symbol | |
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| ID | 5108247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2655232 |
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| End bp | 2656827 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640503651 |
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| Product | isocitrate lyase |
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| Protein accession | YP_001187895 |
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| Protein GI | 146307430 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2224] Isocitrate lyase |
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| TIGRFAM ID | [TIGR01346] isocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.210555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.138791 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAT ATCAAAACGA CATCAAGGCT GTAGCCGCTC TGAAAGAGAA GTTCGGCAGC
AGCTGGAGCG CTATCAACCC CGAGTCCGTC GCCCGTATGC GCGCTCAGAA CCGCTTCAAG
ACCGGTCTGG AAATCGCTCA GTACACCGCT GACATCATGC GCAAGGACAT GGAAGAGTAC
GACGCCGACT CCTCCCTCTA CACCCAGTCC CTGGGCTGCT GGCACGGCTT CATCGGTCAG
CAGAAGCTGA TTTCGATCAA GAAGCACCTG AAGACCACCA ACAAGAAGTA CCTGTACCTG
TCCGGCTGGA TGGTTGCGGC CCTGCGCTCC GACTTCGGCC CGCTGCCGGA CCAGTCGATG
CACGAGAAGA CCGCCGTCTC CGACCTGATC GAAGAGCTGT ACACCTTCCT GCGTCAGGCC
GACAGCCGCG AGCTGGACCT GCTGTTCACC GCGCTGGATG CTGCTCGCGA AGCCGGCGAC
CAGGCCAAGG CTGCCGAGAT CCAGAACCAG ATCGACAACT TCGAGACCCA CATCGTCCCG
ATCATCGCCG ACATCGACGC CGGCTTCGGT AACCCGGAAG CCACCTACCT GCTGGCCAAG
CGCATGATCG AAGCCGGTGC CTGCTGCATC CAGATCGAGA ACCAGGTTTC CGACGAGAAG
CAGTGCGGCC ACCAGGACGG TAAAGTGACC GTTCCGCACG CCGACTTCCT CGCCAAGATC
GCTGCCGTTC GCTACGCCTT CCTCGAGCTG GGCATCGACA ACGGCGTGAT CGTCGCACGT
ACCGACTCCC TGGGCGCCGG CCTGACCAAG CAGATCGCCG TCACCAACAA GCCGGGCGAC
CTGGGCGACC TGTACAACAG CTTCCTCGAT TGCGAAGAAA TCTCCGAAGC CGAGCTGGGC
AACGGCGACG TCGTGATCAA GCGCGAAGGC AAACTGCTGC GTCCGAAGCG CCTGCCGTCC
AACCTGTTCC AGTTCCGCGC TGGCACCGGT GAAGACCGCT GCGTACTGGA CTGCATCACC
AGCCTGCAGA ACGGCGCCGA CCTGCTGTGG ATCGAGACCG AGAAGCCGCA CGTTGGCCAG
ATCAAGGGCA TGGTTGACCG CATCCGTCAG GTCATCCCGA ACGCCAAGCT GGTGTACAAC
AACAGCCCGT CCTTCAACTG GACCCTGAAC TTCCGTCAGC AGGTGTTCGA CGCCATGGCT
GCCGAAGGCA AGGACGTGTC CGCCTACGAC CGCGCCAAGC TGATGAGCGT GGAGTACGAC
GAGACCGAAC TGGCCAAGCT GGCCGACGAG AAGATCCGTA CCTTCCAGCG CGACGGTTCG
GCCCACGCCG GCATCTTCCA CCACCTGATC ACCCTGCCGA CCTACCACAC CGCGGCCCTG
TCCACCGACA ACCTGGCCAA GGGCTACTTC GCCGACCAGG GCATGCTGGC CTACGTGAAG
GGCGTGCAGC GTCAGGAAAT CCGTCAGGGC ATCGCCTGCG TCAAGCACCA GAACATGGCT
GGCTCCGACA TCGGCGACAA CCACAAGGAG TACTTCGCTG GCGAAGCTGC TCTGAAGGCA
AGCGGTAAAG ACAACACCAT GAACCAGTTC CACTAA
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| Protein sequence | MSAYQNDIKA VAALKEKFGS SWSAINPESV ARMRAQNRFK TGLEIAQYTA DIMRKDMEEY
DADSSLYTQS LGCWHGFIGQ QKLISIKKHL KTTNKKYLYL SGWMVAALRS DFGPLPDQSM
HEKTAVSDLI EELYTFLRQA DSRELDLLFT ALDAAREAGD QAKAAEIQNQ IDNFETHIVP
IIADIDAGFG NPEATYLLAK RMIEAGACCI QIENQVSDEK QCGHQDGKVT VPHADFLAKI
AAVRYAFLEL GIDNGVIVAR TDSLGAGLTK QIAVTNKPGD LGDLYNSFLD CEEISEAELG
NGDVVIKREG KLLRPKRLPS NLFQFRAGTG EDRCVLDCIT SLQNGADLLW IETEKPHVGQ
IKGMVDRIRQ VIPNAKLVYN NSPSFNWTLN FRQQVFDAMA AEGKDVSAYD RAKLMSVEYD
ETELAKLADE KIRTFQRDGS AHAGIFHHLI TLPTYHTAAL STDNLAKGYF ADQGMLAYVK
GVQRQEIRQG IACVKHQNMA GSDIGDNHKE YFAGEAALKA SGKDNTMNQF H
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