Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2342 |
Symbol | |
ID | 5108577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2586208 |
End bp | 2587350 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640503584 |
Product | hypothetical protein |
Protein accession | YP_001187832 |
Protein GI | 146307367 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0301397 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGTGC CTTCGCTGTT CGACAGCTTC TTCATGGGCG GTTTCGAGTG TTCGACCCAC CGTCGACAGG ACGGACGGCG GCTCGACCTG ATCGAGAACA CCGCCCACCA GCGCTGGGCA GCCGAAGACT ACACGGCGCT GCGTCAGCAG GGCCTGCGCA GCGCACGGGA TGGTTTGCGC TGGCATCTGA TCGAGGCGAC TCCCGGTCAT TACGACTGGT CCAGCTTCCT GCCGCAGTTG CAGGCCGCCG AACAGGCTGG CGTGCAGGTC ATCTGGGATC TGTGCCATTA CGGCTGGCCT GACCACATCG ATATCTGGCG CCCGCAGTTC GTCGAGCGCT TCGCCCGCTT CGCCGCCGCT GCGGCCCGCC TGGTGCGCGA GCACAGCGAC CGCGTGCCGT TCTACTCGCC GCTCAACGAG ATGTCCTTCT GGGCCTGGGC CGGCGGTGAA GTCGGCTATT TCTCGCCCCT GGCGACAGGC CGCGGCGACG AGCTCAAGCA CCAGCTGATA CGCGCCAGCA TCGCGGCCAT CGAGGCGATC CGCGAGGTCG ATCCGCGAGC GCGTTTCGTG CAGGTCGACC CCGTCATCCA TGTCGTCGCC AGGAGCAACC GCGCCAGCGA GCAGGAGGAT GCCGAGCGCT ATCGCCTGTC GCAGTTCCAG GCCTGGGACA TGCTCACGGG CATGCAATGG CCGGGGCTCG GCGGCAAACC GGAGTATCTG GATATCGTCG GCGTCAACTA CTACCCCGAC AACCAGTGGT TTCTCGGCGG CGATACGCTG TGGCGAGGCG AGCCGCACTA CCGCCCCTTC AGTGGCATTC TCGCCGAGGT CCACCAGCGC TACCGCAGGC CCATCCTGGT GGCCGAAACC GGCGCCGAGG GCGACCAGCG TGTCGACTGG CTGCGCTACG TCGGCGAGCA GGTGCATCTG GCCCTGCAAC GCGGCCTGCC GCTGGAAGGC ATCTGCCTGT ACCCGGTCGT CGACTATCCC GGCTGGATCG ACGACCGCCA TTGCCCGACT GGTCTGTTCG GCTTCGCCGA CGAGCTGGGC CGGCGCCCCG TGCACGCCCC TCTGGCCATG GAGCTGCAGC GCCAGCGAAC GCTGTTCGAG GCGCTGGCCG GACAACTGGC CCGGCAGGCA TGA
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Protein sequence | MHVPSLFDSF FMGGFECSTH RRQDGRRLDL IENTAHQRWA AEDYTALRQQ GLRSARDGLR WHLIEATPGH YDWSSFLPQL QAAEQAGVQV IWDLCHYGWP DHIDIWRPQF VERFARFAAA AARLVREHSD RVPFYSPLNE MSFWAWAGGE VGYFSPLATG RGDELKHQLI RASIAAIEAI REVDPRARFV QVDPVIHVVA RSNRASEQED AERYRLSQFQ AWDMLTGMQW PGLGGKPEYL DIVGVNYYPD NQWFLGGDTL WRGEPHYRPF SGILAEVHQR YRRPILVAET GAEGDQRVDW LRYVGEQVHL ALQRGLPLEG ICLYPVVDYP GWIDDRHCPT GLFGFADELG RRPVHAPLAM ELQRQRTLFE ALAGQLARQA
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