Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2257 |
Symbol | |
ID | 5109201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2487457 |
End bp | 2487966 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640503500 |
Product | hypothetical protein |
Protein accession | YP_001187748 |
Protein GI | 146307283 |
COG category | [S] Function unknown |
COG ID | [COG3685] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0390342 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.0993659 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTACCC CTACCGACAA TCTGCTGGAC TGGCTGCGCG ACGCCCATGC CATGGAGCAA CAGGCCGAGA AGATGCTTAC CGCCCAGGCC GAGCGCCTGG AACATTACCC GGACCTCAAA GCGCGCATCG TCCAGCACAT CGACGAGACC CGTGGCCAGC GCGAGCTGCT GGAGTCCTGT CTGCAACGCC TGGGCAGCAG CCCTTCGACC TTCAAGGACC TCTCCGCCAA GGTCATGGCC TTCGGCCAGG CCGTTGCCGG CATGACGGTC AGCGACGAGG TGGTCAAGGG TGCGATGAGC GGCTACGTGT TCGAGAACAT GGAAATCGCT TCGTACACCG TGCTCATCGC CGCGGCCAAA CGCGCCGGCG ACGCCCAGAC TCAGACCGCC TGCGAACAGA TCCTCAAGCA GGAGGTGGCC ATGGCCGACT GGCTGCGCGA TCACCTGCCG CAGATCACCG TCGCCTTCCT CGAGCGCTCC GCGGCGCCTG ACCTGGACGC CAAACGCTAA
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Protein sequence | MSTPTDNLLD WLRDAHAMEQ QAEKMLTAQA ERLEHYPDLK ARIVQHIDET RGQRELLESC LQRLGSSPST FKDLSAKVMA FGQAVAGMTV SDEVVKGAMS GYVFENMEIA SYTVLIAAAK RAGDAQTQTA CEQILKQEVA MADWLRDHLP QITVAFLERS AAPDLDAKR
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