Gene Pmen_2257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2257 
Symbol 
ID5109201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2487457 
End bp2487966 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content65% 
IMG OID640503500 
Producthypothetical protein 
Protein accessionYP_001187748 
Protein GI146307283 
COG category[S] Function unknown 
COG ID[COG3685] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0390342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0993659 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACCC CTACCGACAA TCTGCTGGAC TGGCTGCGCG ACGCCCATGC CATGGAGCAA 
CAGGCCGAGA AGATGCTTAC CGCCCAGGCC GAGCGCCTGG AACATTACCC GGACCTCAAA
GCGCGCATCG TCCAGCACAT CGACGAGACC CGTGGCCAGC GCGAGCTGCT GGAGTCCTGT
CTGCAACGCC TGGGCAGCAG CCCTTCGACC TTCAAGGACC TCTCCGCCAA GGTCATGGCC
TTCGGCCAGG CCGTTGCCGG CATGACGGTC AGCGACGAGG TGGTCAAGGG TGCGATGAGC
GGCTACGTGT TCGAGAACAT GGAAATCGCT TCGTACACCG TGCTCATCGC CGCGGCCAAA
CGCGCCGGCG ACGCCCAGAC TCAGACCGCC TGCGAACAGA TCCTCAAGCA GGAGGTGGCC
ATGGCCGACT GGCTGCGCGA TCACCTGCCG CAGATCACCG TCGCCTTCCT CGAGCGCTCC
GCGGCGCCTG ACCTGGACGC CAAACGCTAA
 
Protein sequence
MSTPTDNLLD WLRDAHAMEQ QAEKMLTAQA ERLEHYPDLK ARIVQHIDET RGQRELLESC 
LQRLGSSPST FKDLSAKVMA FGQAVAGMTV SDEVVKGAMS GYVFENMEIA SYTVLIAAAK
RAGDAQTQTA CEQILKQEVA MADWLRDHLP QITVAFLERS AAPDLDAKR