Gene Pmen_2202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2202 
Symbol 
ID5109147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2435506 
End bp2436027 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content55% 
IMG OID640503446 
ProductDinB family protein 
Protein accessionYP_001187694 
Protein GI146307229 
COG category[S] Function unknown 
COG ID[COG2318] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0131382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAATA CCGCCATGGG CAGCATGCTC ATCGAATACA AGCGTTGGGC AGACAAGCTT 
TTTCTGAACA GTGTCGCTGA ACTCCCCGCC GAGGAACTCA CTCGCGAACA TGCAGGCCCT
ATCAAGACCA TCATTGCAGT GCTGAACCAT ATGTACGTCG TGGATCGAAT CTGGCAAGCC
CACCTGGAAG GCCGTGAGCA TGGTTTCACG TCACGTCAGG CGATGCCCTA TCCAGACCTC
TCCGAATTGC GTCAAGCTCA ACTGGAGGTC GATAACTGGC TCATTGAGTG GTATGCCAGG
CAGAGCGAAG CGACATTGGC CCGTAGCATC GATTTTGCCT TCGTCTCCGG CAATCGCGGC
AACATGACTG CCGAAGCCAT GGTTTTGCAT CTCGTCAATC ATGCGACCTA TCACAGAGGC
TGGCTCGTGC AGATGTACTT CGAGATACCG GCCATGCCCC CGATGACAGA CCTTTGCGTG
TATCTGACCG AAGCGCAGCC CGGGTCATTG ACTAACTGCT AA
 
Protein sequence
MANTAMGSML IEYKRWADKL FLNSVAELPA EELTREHAGP IKTIIAVLNH MYVVDRIWQA 
HLEGREHGFT SRQAMPYPDL SELRQAQLEV DNWLIEWYAR QSEATLARSI DFAFVSGNRG
NMTAEAMVLH LVNHATYHRG WLVQMYFEIP AMPPMTDLCV YLTEAQPGSL TNC