| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2042 |
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| Symbol | |
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| ID | 5109776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2257184 |
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| End bp | 2258305 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503283 |
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| Product | ABC transporter related |
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| Protein accession | YP_001187535 |
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| Protein GI | 146307070 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.820426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.690755 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGAC AAGAAAAAGG ACAGGCCATG TCGCTCAAGC TCGAACACGT CACCCGTATC
GTCGATGGCC AGGTGCATAT CGACGATGCC TGCCTGAGTT TCGAACCCGG TTCCTTCAAC
GTTCTGCTCG GCCGCACCCT GGCCGGCAAG ACCAGTCTGA TGCGCCTGAT GGCCGGGCTG
GACCGGCCCA GCAGCGGCCG CGTGCTGATG AACGGCGCCG ATGTCACCGG CGTGCCGGTG
CGCCAGCGCA ATGTGTCGAT GGTCTATCAG CAGTTCATCA ACTACCCGAC CCTGACGGTG
TTCGAGAACA TCGCCTCGCC GCTGCGTCAG GCCGGTGTGG CCAAGGAGCT GATCGTCGAG
AAGGTCGAGG CCACCGCGCG CATGCTGCGC ATCGACAAGC TGCTGTCGCG CTACCCGCTG
GAGCTGTCCG GCGGCCAGCA GCAGCGCACG GCCATGGCGC GGGCGCTGGT CAAGGACGCA
TCCCTGATCC TCTTCGATGA GCCCTTGGTC AACCTCGACT ACAAGCTGCG CGAGGAGCTG
CGTCAGGAAA TGCGCGAGCT GTTCCAGGCG CGCCACACCA TCGCCATCTA CGCCACCACC
GAGCCCAATG AAGCGCTGGC CCTGGGTGGC ACCACCACCA TCCTCCACGA AGGGCGGGTG
GTGCAGAGCG GCAAGACCGC CGAGGTCTAC CACCGCCCGC AGCAGGTGCT GGCTGCCGAG
CTGTTCTCGG AACCTGCGAT CAACCTGATG CCGGGACGCA TCAGTGGCAC CGAGGTGAGC
TTCGCCGATT GCGTGCACTT TCCGCTCAAC CCCGATCTGC GCGGCATTGC CGAGGGCGAG
TACCGCTTTG GCGTGCGCCC CAGCCATATC GGCCTGGTGC CGTCCAACGA CGATGATCTG
GAACTGGCCG TGACCGTCGA GCTGGCCGAG ATCAGCGGCT CGGAAACCTT CCTCCACGTG
CGCAACGAGC AGTTCGTGCT GGTGCTGCAC CTGCCGGGCG TGCACGAGTA CGCGGTGGAT
ACGCCGATCC TGATCTACAT CCCCACCCAC AAGCTGTTCG TCTTCGCTGC CGATGGGCAA
TTGGTGCAGG CGCCCAGTCG CCGTCAGGGG AGGGCTGCCT GA
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| Protein sequence | MARQEKGQAM SLKLEHVTRI VDGQVHIDDA CLSFEPGSFN VLLGRTLAGK TSLMRLMAGL
DRPSSGRVLM NGADVTGVPV RQRNVSMVYQ QFINYPTLTV FENIASPLRQ AGVAKELIVE
KVEATARMLR IDKLLSRYPL ELSGGQQQRT AMARALVKDA SLILFDEPLV NLDYKLREEL
RQEMRELFQA RHTIAIYATT EPNEALALGG TTTILHEGRV VQSGKTAEVY HRPQQVLAAE
LFSEPAINLM PGRISGTEVS FADCVHFPLN PDLRGIAEGE YRFGVRPSHI GLVPSNDDDL
ELAVTVELAE ISGSETFLHV RNEQFVLVLH LPGVHEYAVD TPILIYIPTH KLFVFAADGQ
LVQAPSRRQG RAA
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