| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2038 |
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| Symbol | ampC |
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| ID | 5109772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2252509 |
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| End bp | 2253645 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503279 |
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| Product | beta-lactamase |
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| Protein accession | YP_001187531 |
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| Protein GI | 146307066 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.666233 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCAT CCCTTCGACC TCTGCTCCTC GCGCTCGGCC TTTGCCTGGG CAGCCAATCG
GCCTTCGCCG AGCTGCGCCA GGCAGTCGAT GCCGCTGTGG AACCGATGAT GCAGACCTAT
GCCATCCCCG GCATGGCTAT CGCCATCAGC CACAAGGGCC AGCAGCACTT CTTCGAATAC
GGCGTCGCCT CACGTGAAAG CGGCCAGGCC GTGGATCGCC ACACCCTGTT CGAACTGGGC
TCGATCAGCA AGCTCTTCAC CGCCACCCTC GGCGCCTACG CCGAAGCGCG CGGTACGCTG
AACCTCAGCG ACAACGCCAG CCAGTACCTG CCGGGGCTAC AGGGCAGCGC GTTCGATCAC
ATCAGTCTGC TGGACCTGGC CACCTACACC CCTGGCGGCC TGCCACTGCA GTTTCCGGAT
GCAGTCGGCA ACGAACGCCA GATGCTCGAT TACTACCGCA ACTGGCAGGC GGTCTACCCG
CCCGGCACGC AACGGCTGTA TTCAAACCCC AGTATCGGCC TGTTCGGTCA CCTGGCCGCC
GCCAGCCTGG CCAAGCCGTT CCAGGAACTG ATGGAGCAGG ACCTGCTGCC GCAACTGGGC
ATGCAGGAAA GCTACGTGCA GATACCGGCC GCGCAGATGA CGCGCTATGC CTGGGGCTAC
CGCGACGACA AGGCCGTGCG GGTCAGCCCC GGCGCGCTGG ATGCCGAAGC CTACGGGCTG
AAATCCACTG CGGCGGACAT GCTGCGCTTC ATCGACGCCA ACCTGCACCC GGACAAGCTG
CCCGCACCGC TGCACCAGGC CGTCAGCTCC ACCCATCGCG GTTACTATCA GGTCGGCGAC
ATGACGCAGG GCCTGGGCTG GGAGCGCTAT GCCTACCCCA TCAGCCTGGC GAAGCTGCAA
GCGGGCAACT CCGCCGAGAT GGCCCTGCAC CCCCAGGCGG TGGAGCGTTT CAGCGCACCC
ACGCCGGCCG AAGGTGACCT GCTGCTGAAC AAGACCGGCT CTACCAACGG CTTCGGCGCC
TACATCCTGC TGCTTCCGGC ACGCGATACC GGCCTGGTGA TACTCGCCAA CCGCAACTAC
CCCAATGCCG AGCGCGTACG CCTGGCGTTG CAGTTGCTCG AGGCCATCGA TCACTAG
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| Protein sequence | MRPSLRPLLL ALGLCLGSQS AFAELRQAVD AAVEPMMQTY AIPGMAIAIS HKGQQHFFEY
GVASRESGQA VDRHTLFELG SISKLFTATL GAYAEARGTL NLSDNASQYL PGLQGSAFDH
ISLLDLATYT PGGLPLQFPD AVGNERQMLD YYRNWQAVYP PGTQRLYSNP SIGLFGHLAA
ASLAKPFQEL MEQDLLPQLG MQESYVQIPA AQMTRYAWGY RDDKAVRVSP GALDAEAYGL
KSTAADMLRF IDANLHPDKL PAPLHQAVSS THRGYYQVGD MTQGLGWERY AYPISLAKLQ
AGNSAEMALH PQAVERFSAP TPAEGDLLLN KTGSTNGFGA YILLLPARDT GLVILANRNY
PNAERVRLAL QLLEAIDH
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