| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2011 |
|---|
| Symbol | |
|---|
| ID | 5109902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 2221916 |
|---|
| End bp | 2222620 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640503252 |
|---|
| Product | glutamine amidotransferase |
|---|
| Protein accession | YP_001187504 |
|---|
| Protein GI | 146307039 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0518] GMP synthase - Glutamine amidotransferase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0569772 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.0333945 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAAC GCACCCTGCA AGCCATCCGC CACGTCGGTT TCGAAGACCT TGGCAGCTTC
GAGGCGCCGC TGCGCGCAGC CGGTTACCGG ATCGAGTACA TCGATGCCGC GGAACGCGAC
CTGAGCCAGC TCGACCCACT CGCCGCGGAC CTTCTGGTGG TGCTCGGCGG CCCCATCGGG
GTCTACGACC ACGACAGCTA CCCCATCGTC AGCGATGAGC TGCAACTGCT GCGTGCACGC
CTGGCAGCCG ACCGGCCGAC ACTGGGCATC TGCCTTGGCG CGCAGCTGAT GGCCGCTGCC
CTGGGCGCAC GCGTGTACCC CGGGTCGGCC AAGGAAATCG GCTGGTCGCC GCTCGATCTG
GCGCCCGCGG CCGAGTACCA GCCGCTCGCC GCGCTGAACG ACGTGGCCGT GCTGCATTGG
CATGGCGACA CCTTCGACCT GCCGCAAGGC TGCACCCGGC TCGCCTCGAC GTCGCTGTGC
CGCAACCAGG CCTTCGCCCG CGGGCCGAAC GTGCTGGCCC TGCAGTTCCA TCCGGAAGCC
CGTGGCGATC GCTTCGAGCA TTGGCTGCTG GGGCACGCCA GCGAGCTGGC CAGTTCGGGG
ATCGACCCGA TCACCCTGCG CCGCGATGCC AAACGCCACG CACAGGCGCT GGAGCGAGCC
GCTGCCGTGC TGCTCGGCGA CTGGCTGGCG CAGCTGCGCC ACTGA
|
|---|
| Protein sequence | MTQRTLQAIR HVGFEDLGSF EAPLRAAGYR IEYIDAAERD LSQLDPLAAD LLVVLGGPIG
VYDHDSYPIV SDELQLLRAR LAADRPTLGI CLGAQLMAAA LGARVYPGSA KEIGWSPLDL
APAAEYQPLA ALNDVAVLHW HGDTFDLPQG CTRLASTSLC RNQAFARGPN VLALQFHPEA
RGDRFEHWLL GHASELASSG IDPITLRRDA KRHAQALERA AAVLLGDWLA QLRH
|
|---|
| |