Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1994 |
Symbol | |
ID | 5109885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2203587 |
End bp | 2203901 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640503235 |
Product | peptidase |
Protein accession | YP_001187487 |
Protein GI | 146307022 |
COG category | [S] Function unknown |
COG ID | [COG3212] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.914593 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.197441 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCTGC GTAGCACCCT CGCACTTGCG CTGATCCTCA CCTGCGGTTT GGCGGCCGCT CCGGGCCTGG CCCGCGACCT CGATCAGGAC GAGGCGCTGC GCCTGCGCCG GGAAGGCGTG ATCATGCCGT TCGAGCAGTT GATGCAGCAT GTCGGCCAGG CCTATCCCGG CTCGACCTTG CTGGAGGCCG AACTGGAGGA AGAGGACGGC ATACTGGTGT ACGAGGTGGA AATCCTCACC CTCCAGGGTG TGGTGCGTGA ACTGGAACTG GATGCCCGCA ACGGCAACAT CCTGAAGGAC GAGGAAGACG ACTGA
|
Protein sequence | MNLRSTLALA LILTCGLAAA PGLARDLDQD EALRLRREGV IMPFEQLMQH VGQAYPGSTL LEAELEEEDG ILVYEVEILT LQGVVRELEL DARNGNILKD EEDD
|
| |