Gene Pmen_1994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1994 
Symbol 
ID5109885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2203587 
End bp2203901 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content63% 
IMG OID640503235 
Productpeptidase 
Protein accessionYP_001187487 
Protein GI146307022 
COG category[S] Function unknown 
COG ID[COG3212] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.914593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.197441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGC GTAGCACCCT CGCACTTGCG CTGATCCTCA CCTGCGGTTT GGCGGCCGCT 
CCGGGCCTGG CCCGCGACCT CGATCAGGAC GAGGCGCTGC GCCTGCGCCG GGAAGGCGTG
ATCATGCCGT TCGAGCAGTT GATGCAGCAT GTCGGCCAGG CCTATCCCGG CTCGACCTTG
CTGGAGGCCG AACTGGAGGA AGAGGACGGC ATACTGGTGT ACGAGGTGGA AATCCTCACC
CTCCAGGGTG TGGTGCGTGA ACTGGAACTG GATGCCCGCA ACGGCAACAT CCTGAAGGAC
GAGGAAGACG ACTGA
 
Protein sequence
MNLRSTLALA LILTCGLAAA PGLARDLDQD EALRLRREGV IMPFEQLMQH VGQAYPGSTL 
LEAELEEEDG ILVYEVEILT LQGVVRELEL DARNGNILKD EEDD