Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1993 |
Symbol | |
ID | 5109884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2203279 |
End bp | 2203587 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640503234 |
Product | peptidase |
Protein accession | YP_001187486 |
Protein GI | 146307021 |
COG category | [S] Function unknown |
COG ID | [COG3212] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.872282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.14577 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGAT TGATCAGCCT TGCGACACTT GTCACCCTTG CCGGTGTGGT TACCATTGCC CAGGCCCGCG ACCTTGGCCC GGACGAAGCA AAGCGTCTGC AGGATGCCGG CACCATCAAA TCTTTCGAGC AGCTCGATGA AGCGATCCTT GCCCAGCACC CTGGCGCGCG TATCGAGGAA ACCGAGCTTG AAGATGAATA CGGCCGCTAC ATCTACCAGG TGGACCTGCG AGATGCACAG GGGCAACAGT GGGACCTGGA GCTGGACGCC AGCACCGGGG AAATTCTCAA GAACCACCAG GACGATTGA
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Protein sequence | MNRLISLATL VTLAGVVTIA QARDLGPDEA KRLQDAGTIK SFEQLDEAIL AQHPGARIEE TELEDEYGRY IYQVDLRDAQ GQQWDLELDA STGEILKNHQ DD
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