| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1957 |
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| Symbol | |
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| ID | 5109848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2153344 |
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| End bp | 2155206 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503191 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_001187450 |
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| Protein GI | 146306985 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0809644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.548455 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAA GAAACCTACC CAGCACCCCG CGCCCCCTGG CGCTCGCCCT GATGCTGGCC
GGCGGCCTGG CGCTGGGCCA GGCCGCGTTC GCCAAGCCGG TCACCTGGGA AGACATTGCC
AACGACCACA CCACCACCAG CAACGTGCTG CAGTACGGCA TGGGCACCAA CGCCCAGCGC
TGGAGCCCCT TGGCCCAGGT CAACGCCGAC AACGTGTTCA AGCTGACCCC GGCCTGGAGC
TACTCCTTCG GTGACGAGAA GCAGCGCGGC CAGGAGTCCC AGGCCATCAT CCACGACGGT
GTGGTCTACG TGACCGGCTC CTACTCGCGC GTCTTCGCCC TCGACGCCAA GACCGGCAAG
CGCCTGTGGA CCTACAGCCA TCGCCTGCCC GACGACATCC GCCCGTGCTG CGACGTGGTC
AACCGCGGCG CCGCCATCTA TGGCGACAAG ATCTACTTCG GCACCCTCGA CGCCCGCGTC
GTGGCGCTGA ACAAGGACAC CGGCAAGGTG GTCTGGAACA AGAAATTCGG CGATCACTCC
GCCGGCTACA CCATGACCGG CGCGCCGACC ATCGTGAAGG ATCAGAAAAG CGGCAAGGTG
CTGCTGATCC ACGGCAGCTC CGGTGACGAG TTCGGCGTGG TCGGCCGCCT GTTCGCACGC
GACCCGGATA CTGGCGAAGA AGTCTGGATG CGCCCCTTCG TCGAAGGGCA CATGGGTCGC
CTGAACGGCA AGGACAGCAC CCCGACCGGC GACATCAAGG CGCCGAGCTG GCCGGACGAT
CCCAACCACC CGACCGGCAA GAAGGAAGCC TGGAGCCAGG GCGGCGGCGC GCCGTGGCAG
AGCGCCAGTT TCGATGCCGA AACCAACACC ATCATCATCG GCGCCGGCAA CCCGGCCCCA
TGGAACGGCT GGGCGCGCAC CGCAGACGGC GGCAACCCGC ACGATTACGA CAGCCTGTAC
ACCTCCGGCC AGGTTGGCGT CGACCCGACC ACCGGCGAAG TGAAGTGGTT CTACCAGCAC
ACCCCGAACG ATGCCTGGGA CTTTTCCGGC AACAACGAGC TGGTGCTGTT CGACTACAAG
GACAAGGACG GCAAGGTCAC CAAGGCCACC GCCCACGCTG ACCGCAACGG CTTCTTCTAC
GTGGTCGACC GCGCCAACGG CAAGCTGAAG AACGCCTTCC CCTTCGTCGA CAAGATCACC
TGGGCCAGCC ATATCGATCT GGAGACCGGC CGCCCGGTCG AGAACCCGGG CCAGCGCCCG
CCGAAACCCA AGGCCGGCGA AACCAAGGGC CAGGTGGTCG AGGTCTCCCC GCCCTTCCTC
GGTGGCAAGA ACTGGAACCC CATGGCCTAC AGCCAGGACA CCGGCCTGTT CTACGTACCG
GCCAACCACT GGAAGGAGGA CTACTGGGCC GAAGAGGCGC ATTACAAGAA AGGCTCTGCC
TACCTGGGCA TGGGCTTTCG CATCAAGCGC CTGTACGACG ACCACGTCGG CATCCTGCGC
GCCATGAACC CCACCACCGG CAAGGTCGCC TGGGAACACA AGGAGCGTCT GCCGCTGTGG
GCCGGCGTAC TGGCCACCAA GGGCAATCTG GTGTTCACCG GCACCGGCGA CGGCTACTTC
AAGGCCTTCG ACGCCAAGAA CGGCAAGGAG CTGTGGAAGT TCCAGGTCGG CACCGGAATC
ATCTCCCCGC CCGTCACCTG GGAGCAGGAC GGCGAGCAGT ACATCGGCGT GACCGCCGGT
TACGGCGGCG CCGTGCCGCT GTGGGGCGGC GACATGGCCG ACCTGACCAA GCCGGTCGCC
CAGGGTGGTT CCTTCTGGGT GTTCAAGCTG CCGAGCTGGG ACAAGGCCAG CGCCCAACGC
TAA
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| Protein sequence | MTTRNLPSTP RPLALALMLA GGLALGQAAF AKPVTWEDIA NDHTTTSNVL QYGMGTNAQR
WSPLAQVNAD NVFKLTPAWS YSFGDEKQRG QESQAIIHDG VVYVTGSYSR VFALDAKTGK
RLWTYSHRLP DDIRPCCDVV NRGAAIYGDK IYFGTLDARV VALNKDTGKV VWNKKFGDHS
AGYTMTGAPT IVKDQKSGKV LLIHGSSGDE FGVVGRLFAR DPDTGEEVWM RPFVEGHMGR
LNGKDSTPTG DIKAPSWPDD PNHPTGKKEA WSQGGGAPWQ SASFDAETNT IIIGAGNPAP
WNGWARTADG GNPHDYDSLY TSGQVGVDPT TGEVKWFYQH TPNDAWDFSG NNELVLFDYK
DKDGKVTKAT AHADRNGFFY VVDRANGKLK NAFPFVDKIT WASHIDLETG RPVENPGQRP
PKPKAGETKG QVVEVSPPFL GGKNWNPMAY SQDTGLFYVP ANHWKEDYWA EEAHYKKGSA
YLGMGFRIKR LYDDHVGILR AMNPTTGKVA WEHKERLPLW AGVLATKGNL VFTGTGDGYF
KAFDAKNGKE LWKFQVGTGI ISPPVTWEQD GEQYIGVTAG YGGAVPLWGG DMADLTKPVA
QGGSFWVFKL PSWDKASAQR
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