Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1944 |
Symbol | |
ID | 5110071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2141791 |
End bp | 2142366 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640503178 |
Product | hypothetical protein |
Protein accession | YP_001187437 |
Protein GI | 146306972 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.80802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTACC GTCTGCCCCT GCGCGCAGGC CTGATGTTCG TCTCGCTGCT GCTGGTCTGC GCCGTGCAGT CAGAAGAGCT TTTCGATGCC GAAGGCTATC GCAGCAGCCA ATACCGCAGC CCGACGCCGA GCAGCCTGGA CGGCGTGCAA ACCCTGGACA CCCCCGCCCT GCAACAACTC CTGGCCGAGC GCCCGGAAAC ACGCCTGATC GACGTCTATC GGCGCACCTG GCTGAACGAG CGATTCATCG AAGACGAGCC CCACGCCAAC CTGCCCGGCA GCCTGTGGCT GGCCAACACC GGCAACGGCA ATCTCGCGGC GCCATGGCAA CGCTACCTGG CTCATTACCT GCACCAGGCC AGCGGCGGCG ACCTGCGCCA CCCCTTCGTC TTCTACTGCC GCTCCGACTG CTGGCTGAGC TGGAACGCCG CACGCCGCGC CCATGCGCTG GGTTATCGCC AGCTGTACTG GTACCGTGAC GGCATCGACG CCTGGCAGCA GGCCGGCCTG CCGCTGGTGC CCGCTCAGCC GGCCGAACTG CCTGGCGCTT TCCTCACCCC CAACGCCGCA CCATAA
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Protein sequence | MKYRLPLRAG LMFVSLLLVC AVQSEELFDA EGYRSSQYRS PTPSSLDGVQ TLDTPALQQL LAERPETRLI DVYRRTWLNE RFIEDEPHAN LPGSLWLANT GNGNLAAPWQ RYLAHYLHQA SGGDLRHPFV FYCRSDCWLS WNAARRAHAL GYRQLYWYRD GIDAWQQAGL PLVPAQPAEL PGAFLTPNAA P
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