Gene Pmen_1944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1944 
Symbol 
ID5110071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2141791 
End bp2142366 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content67% 
IMG OID640503178 
Producthypothetical protein 
Protein accessionYP_001187437 
Protein GI146306972 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.80802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTACC GTCTGCCCCT GCGCGCAGGC CTGATGTTCG TCTCGCTGCT GCTGGTCTGC 
GCCGTGCAGT CAGAAGAGCT TTTCGATGCC GAAGGCTATC GCAGCAGCCA ATACCGCAGC
CCGACGCCGA GCAGCCTGGA CGGCGTGCAA ACCCTGGACA CCCCCGCCCT GCAACAACTC
CTGGCCGAGC GCCCGGAAAC ACGCCTGATC GACGTCTATC GGCGCACCTG GCTGAACGAG
CGATTCATCG AAGACGAGCC CCACGCCAAC CTGCCCGGCA GCCTGTGGCT GGCCAACACC
GGCAACGGCA ATCTCGCGGC GCCATGGCAA CGCTACCTGG CTCATTACCT GCACCAGGCC
AGCGGCGGCG ACCTGCGCCA CCCCTTCGTC TTCTACTGCC GCTCCGACTG CTGGCTGAGC
TGGAACGCCG CACGCCGCGC CCATGCGCTG GGTTATCGCC AGCTGTACTG GTACCGTGAC
GGCATCGACG CCTGGCAGCA GGCCGGCCTG CCGCTGGTGC CCGCTCAGCC GGCCGAACTG
CCTGGCGCTT TCCTCACCCC CAACGCCGCA CCATAA
 
Protein sequence
MKYRLPLRAG LMFVSLLLVC AVQSEELFDA EGYRSSQYRS PTPSSLDGVQ TLDTPALQQL 
LAERPETRLI DVYRRTWLNE RFIEDEPHAN LPGSLWLANT GNGNLAAPWQ RYLAHYLHQA
SGGDLRHPFV FYCRSDCWLS WNAARRAHAL GYRQLYWYRD GIDAWQQAGL PLVPAQPAEL
PGAFLTPNAA P