| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1889 |
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| Symbol | |
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| ID | 5110018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2079755 |
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| End bp | 2080837 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503121 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001187384 |
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| Protein GI | 146306919 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0152823 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.720898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACTTG CACAAGCGGG CTTCGGTTAT GGCATAGTCG GTCAGAATAT TGTGATTTTC
GGTCAAGCCA TGTCGCCGCC CTGGCCCCCA CGCCGCAGCA TCGTCAGCAT CCAGTTGCTC
ACCCAGTTGG GCCTCGATCT CGGCCTGAAT CTGGACGTCT GCCTGAAAGA TACCGGTCTA
GACCCGATGC AACTGGCCAG CCTGCACGGC GAAGTGGATG CCGAACGCGA GCTGCGGCTG
ATCGCCAACC TGCTCGAAGC CCTGCCGGAC CTGGGCGATC TGGGTCTGCA GGCTGGCCGG
CGCTATCACC TGACCACCTA TGGCGCCTGG GGCTATGCCA TTCTCAGCAG CGCCACGGTG
CGCCAGGCTG CCGAACTGGG GCTGCGCTAC CACGGCCTGA CCTATGCATT CACCCGCATC
AGCCTGAACC TGAAGGATGG CGTGGCCAGC CTGCACTTCG ACGACAGCGC CTTACCGCCG
GCGCTGCACG ACTTCATCGT GCAGCGCGAC ATGCTCGGTG CGTTGGTGGT GGTGCGTGAA
CTGCTGGGCA GTCCGCTGCC GATCCGCTCG GTGGAGCTGC GCCAGGCCAC GCCAAGCGAT
ATGACCCCCT TTGTCGAAGC CTTCGGCCAG GTGCCGCACT TCGGCGCGCA GCACAATCGC
CTCGGCTTTT CCGCCGATCT GCTGGACGAT CCGCTGCCAA GGGCCAATTC GCAGCTGGTC
AGCGCCTGCG AGCGGCAATG TCAGATGCTG CTGGCTCGCC ATCAATGGCA CCAGGGCGTG
GCCGGACGGG TGCGCCAGCT TCTCCTGCAA ACGCCGGGAC AGATGGCCGA TATGGAACAG
GTCGCCAGCC GCCTGCACCT GAGCAGCCGT ACCCTGCGCC GGCGTCTGAT CGAGGAAGGC
AGCAGCTTTC GCGCGCTACA GGACGAAGTG CGCGAGGCCC TGGCCGATGA GCTGCTGGCC
GCCGGCGGCC TGAGCCTGGA GGAGATCGCC GAGCGCCTGG GTTATGGCGA GCTGTCGAAC
TTCATTCATG CCTTCAAGCG CTGGAAAGGC ACCACGCCGG GACGCTATCA GCGCGGCGCA
TAG
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| Protein sequence | MLLAQAGFGY GIVGQNIVIF GQAMSPPWPP RRSIVSIQLL TQLGLDLGLN LDVCLKDTGL
DPMQLASLHG EVDAERELRL IANLLEALPD LGDLGLQAGR RYHLTTYGAW GYAILSSATV
RQAAELGLRY HGLTYAFTRI SLNLKDGVAS LHFDDSALPP ALHDFIVQRD MLGALVVVRE
LLGSPLPIRS VELRQATPSD MTPFVEAFGQ VPHFGAQHNR LGFSADLLDD PLPRANSQLV
SACERQCQML LARHQWHQGV AGRVRQLLLQ TPGQMADMEQ VASRLHLSSR TLRRRLIEEG
SSFRALQDEV REALADELLA AGGLSLEEIA ERLGYGELSN FIHAFKRWKG TTPGRYQRGA
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