Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1822 |
Symbol | |
ID | 5109952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2011030 |
End bp | 2012067 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640503054 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_001187318 |
Protein GI | 146306853 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.179572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.795159 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGATAC TGATCGTCTC CGACGCCTGG TCGCCGCAGG TCAATGGCGT GGTCACCAGC CTGGCTGCCC TGGTGCGCGA GCTGCGCGGT CTGGGGCATC AGGTCAAGCT GCTGTCGCCA GCGGATTTTC GTTCAGTGCC CTGTCCGACC TATGCGGAGA TCCCGCTGGT GTGGGATCTG TGGCGGGTCG GCGCGGCGAT TCGCGACTTT CGCCCCGACT GCGTGCATCT CGCGACCGAA GGGCCGCTGG GCTGGGCGGC GCGCAACTGG TTGAACAAGC GCGGCCTGGC GTTCTCCAGC GCCATCCACA CCCGCTTTCC CGAGTACGTC AGCACACGCT GGCCGTGGAT CGCACCGCGC TGGGGCTACG CCTACCTGCG GGCCTTCCAC CGCACCAGTC AGGCGGTACT GGTAACCACC GAGCGCCTGC GCGAGGAGTT CGCCGGCTGG CACCTGCAAC GCCTGCAGCT GTGGCGCAAG GGGGTCGATA CCACCTTGTT TCGTCCCGAG CAAAGCCGCC CACGGCCGCC GCATCCGGTG TTTCTCTACG TCGGGCGTAT CGCCCCGGAG AAGAACCTCG AGGCCTTTCT CGATCTGCAG CTGCCCGGCG AGAAGCGTTT GGTCGGTGAT GGTCCGCAGC GCGAGGCGCT GCAGCTGCGC TATCGGCAGG TACGCTTTCT CGGTTATCGC CATGGCCAGG CGTTGGCCGA GGCCTATCAG GATGCGTCGG TACTGGTTTT CCCCTCGCGC ACCGATACCT ATGGTCTGGT GATGCTCGAG GCGCTGGCCT GCGGCACGCC GGTGGCGGCC TTCCCGGTGG CCGGGCCGCT GGATGTGCTG CAACAGGGCG TCAGTGGGGT GCTGGATGAC GATCTGGGCG CCGCCTGCCT GGCGGCGCTG GAACTGGATC GGGCGCGCTG CGCCGAGCTG GCGGCTGCGC AGTCCTGGCG GGCTTCGGCG CTGGAGTTCC TGGCCCTGCA GCCGCTGATC GACGGCGAGC CGGCGGCGCT GGGCGAGGCG TTGGTGGACA GTCGGTAG
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Protein sequence | MRILIVSDAW SPQVNGVVTS LAALVRELRG LGHQVKLLSP ADFRSVPCPT YAEIPLVWDL WRVGAAIRDF RPDCVHLATE GPLGWAARNW LNKRGLAFSS AIHTRFPEYV STRWPWIAPR WGYAYLRAFH RTSQAVLVTT ERLREEFAGW HLQRLQLWRK GVDTTLFRPE QSRPRPPHPV FLYVGRIAPE KNLEAFLDLQ LPGEKRLVGD GPQREALQLR YRQVRFLGYR HGQALAEAYQ DASVLVFPSR TDTYGLVMLE ALACGTPVAA FPVAGPLDVL QQGVSGVLDD DLGAACLAAL ELDRARCAEL AAAQSWRASA LEFLALQPLI DGEPAALGEA LVDSR
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