| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1715 |
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| Symbol | |
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| ID | 5106569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1887581 |
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| End bp | 1889545 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502946 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001187211 |
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| Protein GI | 146306746 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2015] Alkyl sulfatase and related hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0756125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0757403 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTATTT TCCGCCTTAG CGCCTTGGCC ATGGCGCTCA CCTTTTCCGG CGCGATCCTC
GCCGACGCCT CCGCTTCCAA AGCCGCCAGC GAAAGTACCC GCGAAAGCAA TCAGGCCTGG
TTGCAGCGCC TGCCTTTCGA CGACCGAAGC AGTTTCGAGG ATGCCCGGCG CGGCCTGATC
GCCCCCTTCA CCGGGGTGGT CGAAAATGCC AAGGGGCAGG TGGTCTGGGA TCGCCTGGCG
TACAACTTCC TCGATGGCAA CGACGCGCCC GCCAGTGTCA ACCCCAGCCT GTGGCGCATG
GCCCAGCTGA ACAACATGGC CGGGCTGTTC GAGGTGCGCG AGCGCATCTA CCAGATTCGC
GGCATGGACC TGTCCAACAT GACGATCATC GAGGGCGACA GCGGTCTGAT CCTGATCGAC
CCCCTGATCA GCACCGAGAC CGCCCGCGCC GGGCTCGAAC TCTATTACCA GCATCGCCCG
CGCAAGCCGT TGCGAGCGGT GATCTACAGC CATTCGCATG TCGATCACTT CGGCGGTGTA
CGCGGAGTGA TCGACGAAGC CGACGTTAAG GCGGGCAAGG TCAGGGTGAT CGCGCCGGAG
GGCTTCTACG AGCATGCGGT CAGCGAGAAC GTGCTGGCAG GTCCGGCCAT GATGCGCCGC
GCCCAGTACA TGTACGGCGC GCTACTGCCG CGTGGCGAGC GTGGTCAGGT CGACTCGGGC
CTCGGCAAGG GCACCCCGAG CAACGCGACC GTGACCCTGA TCGCCCCCAC CGAGCTGATC
GCCCAGCCGC TGGAAACCCA CGTGATCGAC GGTGTGGAGA TCGAATTCCA GCTCACGCCC
GGCACCGAGG CACCGGCGGA AATGAACATG TACCTCCCGC AGTTCAAGAC CCTGTGCATG
GCCGAGAACG CCACCCATAC CCAGCACAAC GTGCTGACGC TGCGCGGCGC CCTGGTGCGC
GACGCCAAGG TCTGGGCCCA CTATCTGGAC GAGGCGCTGG TGCGCTATGG CGAGCAGGCC
GAGGTGCTGT TCGCCCAGCA TCACTGGCCG ACCTGGGGAG GCGAGCGGAT CCGCGAATAC
CTGGCCGATC AGCGCGACAT GTATGCCTTT CTCGACAGCC AGACGCTGCG CCTGATCAAT
CAGGGGCTGA CTGCCACCGA GATCGCCGCC GAGCTGCGGT CGCTACCGCC GCGTCTGGCC
AGCAAGTGGT ACAGCCGCGA CTACTACGGC TCGCTCAGCC ATAACGTACG CGCGGTTTAC
CAGCGCTACA TGGGCTTCTA CGACGGCAAC CCGGCCAACC TCGACCCGCT GCCGCCGGAA
GATGCCGGGC GCCGCTACGT GGCCGCCATG GGCGGCGCCG ACGCAGTGCT GAAAACGGCC
AACCAGGCCT TCGCCGATGG CGACTACCGC TGGGCGGCGC AGCTGCTCAA CCACCTGGTG
TTCGCCGCGC CGGACAATGC GGCGGCGCGC GAGCTGCAGG CCGACACGCT GGAGCAGCTC
GGCTACCAGA GCGAGAACGC CACCTGGCGC AACGTCTATC TGAGCGGTGC ACACGAGCTG
CGCTCAGGCG TGGCCGAGGC CCGGGCGCGC AACGGTGCGC CGGACATGGT GCGGGCGCTG
ACGCCGAGCA TGTTCTTCGA TTACCTGGCC GTGCGCATCG ACGCGATGAA GGCCGCCGAC
GAGGACCTGT CGATCAACTG GCGCTTCACC GATCTGGACG AGAACTATGC CCTGACGCTG
CGCAACGGTG TGCTGACCCA CCGCAAGCAA TCACGCCATG CTCAGGCGGA CATCGACCTG
AGCATGAGCA AGGAGCTGCT CGACCGTATC GCGCTGAAGG AAACCGGTTT TCTCAAGGAG
GCCACCATTG GTGGCATCGA GATCGCAAGC GGCCGCCTGA AGTTGCTCAG GCTGCTCGGC
GGCCTCGACG AGGCGAACCC GCAGTTCAAC CTCGTGACGC CCTGA
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| Protein sequence | MPIFRLSALA MALTFSGAIL ADASASKAAS ESTRESNQAW LQRLPFDDRS SFEDARRGLI
APFTGVVENA KGQVVWDRLA YNFLDGNDAP ASVNPSLWRM AQLNNMAGLF EVRERIYQIR
GMDLSNMTII EGDSGLILID PLISTETARA GLELYYQHRP RKPLRAVIYS HSHVDHFGGV
RGVIDEADVK AGKVRVIAPE GFYEHAVSEN VLAGPAMMRR AQYMYGALLP RGERGQVDSG
LGKGTPSNAT VTLIAPTELI AQPLETHVID GVEIEFQLTP GTEAPAEMNM YLPQFKTLCM
AENATHTQHN VLTLRGALVR DAKVWAHYLD EALVRYGEQA EVLFAQHHWP TWGGERIREY
LADQRDMYAF LDSQTLRLIN QGLTATEIAA ELRSLPPRLA SKWYSRDYYG SLSHNVRAVY
QRYMGFYDGN PANLDPLPPE DAGRRYVAAM GGADAVLKTA NQAFADGDYR WAAQLLNHLV
FAAPDNAAAR ELQADTLEQL GYQSENATWR NVYLSGAHEL RSGVAEARAR NGAPDMVRAL
TPSMFFDYLA VRIDAMKAAD EDLSINWRFT DLDENYALTL RNGVLTHRKQ SRHAQADIDL
SMSKELLDRI ALKETGFLKE ATIGGIEIAS GRLKLLRLLG GLDEANPQFN LVTP
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