Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1642 |
Symbol | |
ID | 5109616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1804318 |
End bp | 1804887 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640502870 |
Product | hypothetical protein |
Protein accession | YP_001187138 |
Protein GI | 146306673 |
COG category | [S] Function unknown |
COG ID | [COG3816] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.191917 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.867581 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATC CAGGCAAGGC CGGCGACCTG CTGGCGCAGA TCCCCAAGGG CGAAGGCAAG GGCCTGCCCC CCGTGCACCT GTGGAACCCC GATTTCTGTG GCGATATCGA CATGCGCATC GCCCGCGACG GCACCTGGTA TTACCTGGGT ACGCCCATCG GCCGCAAACC CATGGTGCGG CTGTTTTCCA CCATCATCCG CCGTGACGGC GACGACTACT TCCTGATCAC GCCGGTGGAG AAGGTGGGCA TCAGGGTGGA CGACGCACCC TTCGTCGCCG TGACCCTGCA GGTCGAGGGC GAGGGGGAAG CGCAGGTGCT GCGCTTTACC ACCAACGTCG AGGACGAGGT GGTGGCCGGC GCCGAGCATC CGATTCGGGT AGAGATCGAT CCTGCGACAC TGGAACCCTC GCCCTACATT CTGGTGCGGC GTAACCTCGA AGCGCTGATA CACCGCAACG TGTTCTACCA GCTGGTGGAG CTGGCGGTGG AGCGCGAAGT GGACGGCAAG CCCTGGCTGG GGGTGTGGAG TGCCGGGCAG TTCTATCCCA TCGGGCCTTC CCCGGTCTGA
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Protein sequence | MSDPGKAGDL LAQIPKGEGK GLPPVHLWNP DFCGDIDMRI ARDGTWYYLG TPIGRKPMVR LFSTIIRRDG DDYFLITPVE KVGIRVDDAP FVAVTLQVEG EGEAQVLRFT TNVEDEVVAG AEHPIRVEID PATLEPSPYI LVRRNLEALI HRNVFYQLVE LAVEREVDGK PWLGVWSAGQ FYPIGPSPV
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