| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1561 |
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| Symbol | |
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| ID | 5109219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1720528 |
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| End bp | 1721244 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502789 |
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| Product | pirin domain-containing protein |
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| Protein accession | YP_001187057 |
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| Protein GI | 146306592 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1741] Pirin-related protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.100602 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGGAG GATTGACCAT GATCGATATA CGTCCGTTCG AACAACTCGG TGGCGCTCAC
CACGGTTGGC TGAATGCCCG CCATCACTTT TCCTTCGCCG AATACTACGA TGCCGAGCGG
ATGAACTGGG GCCGCCTACG CGTCTGGAAC GACGATGAGA TCGCGCCGCA CTCGGGCTTC
CCGCCTCATC CGCACCGCGA CATGGAGATC ATCACCTACG TTCGCGAAGG GGCGATCAGC
CATCAGGACA ACCTGGGCAA CAAGGGCCGT ACCGAAGCGG GCGACGTGCA GGTGATGAGT
GCCGGCACCG GCATCGCCCA CAGCGAGTAC AACCTGGAGG ACGAGACCAC CAAGATCTTC
CAGATATGGA TCCAGCCGAA CCAGGCAGGG CTGCCGCCGT CCTGGGGCGC CAAGCCGTTC
CCCAAAGGCG ATCGCTCCGG AGCCTTCGTC ACCCTGGCCA GCGGCTACGA GGAAGACGTC
GATGCCCTGC GCATTCGCAC CGACGCACGC CTGGTAGCGG CCACGGTCAA GGCCGGGCAA
AGCGCCGAGT ACGTGCTGCA GCCGGGTCGC AAGGCCTATC TGGTGGGCGC CACCGGCGCC
TTCACGGTCA ACGGCGTAGC GGCCAAGGCA CGCGACGGCG TGGCCATCGC CGATGAAACG
CTGATCCGCA TCGAGGCCCA GGAAGACAGC GAAATCGTGC TGGTGGATGT CGCCTGA
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| Protein sequence | MTGGLTMIDI RPFEQLGGAH HGWLNARHHF SFAEYYDAER MNWGRLRVWN DDEIAPHSGF
PPHPHRDMEI ITYVREGAIS HQDNLGNKGR TEAGDVQVMS AGTGIAHSEY NLEDETTKIF
QIWIQPNQAG LPPSWGAKPF PKGDRSGAFV TLASGYEEDV DALRIRTDAR LVAATVKAGQ
SAEYVLQPGR KAYLVGATGA FTVNGVAAKA RDGVAIADET LIRIEAQEDS EIVLVDVA
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