Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1512 |
Symbol | |
ID | 5108463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1674185 |
End bp | 1675630 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640502741 |
Product | lysophospholipase-like protein |
Protein accession | YP_001187009 |
Protein GI | 146306544 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.145364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.79718 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTAC CGCGCATGCG CAACGTGATG GCCTGGACGC TTGTACTGCT GTTGCTGATC GCGGTGGCCC TGCTGGGCGT TCGCATTGCC GGGCTGTCGT CGTTGCCCGA TCTGCAGCCC TGGCACCGCC TGGTGCCGCA GGAACTGGAG GCGGATGAAC TGGACCAGGC CGACTGGCAG GCCTATCTGG CAGCCGAGGC CGCGATACAC CAGCGCCTGC AACGCGAGCT GATCGAGCCG GTGACGGCGG CCGGCGTGGC ACCCTTCAGC CGCTATTCCA GCGACAGCCC CGTCTACCCC GGCAAGCTGT CGCAGGACTG GAACCGTTCT TTCATCCTGC CGCCAGCCGG TGCGCCACGC GGCGTGGTGG TGTTGCTGCA CGGACTGACC GATTCGCCCT ACAGCCTTCG CCATATCGCC AGCCACCTGA GCGAGCAGGG CCTGCTCGCC GTGGTACCGC GCATGCCCGG CCACGGCACC GTGCCGGGTG CGCTGACCGC GGCACGCTGG GAGCAGTGGC TGGCCGCCAC CCGCCTGGCG GTGCGCGAAG CCCGGCGCCA GGTGCCGGAC GGGCCGCTGT ACCTGATCGG CTATTCCAAC GGCGGCGCCC TGGCGCTGCG CTACAGCCTG GCTGCGCTGG AGGACGAGCG CCTGGCCATG CCGCAGCGTC TGGTGCTGAT TTCGCCGATG GTCGGGGTCA CCCGCTATGC CCGTTATGCC GGCCTGGCAG CCTTGCCGGC AGTGCTGCCG GCGTTCGCCA AATCGGCCTG GATGAACGTG CTGCCGGAGT TCAATCCGTT CAAGTACAAC TCCTTTCCGG TGCATGCCGC GCGGCAGACC TACGAGCTGA CGCATGAGGT GCAGCGCGCC TTCGATGCCG CCGAGGCCGA TGGACGTTTG CAGCGGCTGC CGCCGGTGCT GGCCTTCCAG TCGCTGGCCG ACAGCACGGT AAGCACGCCA GCGGTGGTGC GCGACCTGTT CGAACGCCTG CCGGCCAACG GCAGCGAACT GGTGGTCTTC GACATCAATC GTTCGCAGGC GGTCAGCTCG CTGCTGCGAG CCGACATGAG CAGCTTGCTG GAGCAGTTGC TGCCGCCGGC CGAGCGCGAC TACGACCTGA CCGTGGTGGG CGTGGCACCC GAACGGGGGC GTGCGGTCGA GGCCCGGCGT ACCGCGGCGG GCAGCTTGCA GGCGATCAGC CAGCCTCTGG GCGTCGACTA CCCGAGCCAG CTGTTCTCGC TGTCGCACGT GGCACTGCCG TTTCCGCCCA GCGATCCCTT GTACGGCAGC GACCCGGCGC CAGGCGAAGA CTACGGCGTG GCGCTGGGCA CCCTGGCGCC GCGCGGTGAA CACGGCGTGC TGGTGGTGGG GTTGGGTAGC CTGCAGCGGG TGACGTCCAA TCCCTTCTAC GACTACCTGC GCGAGCGCAT CGACGAAGAC CTGTAG
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Protein sequence | MRLPRMRNVM AWTLVLLLLI AVALLGVRIA GLSSLPDLQP WHRLVPQELE ADELDQADWQ AYLAAEAAIH QRLQRELIEP VTAAGVAPFS RYSSDSPVYP GKLSQDWNRS FILPPAGAPR GVVVLLHGLT DSPYSLRHIA SHLSEQGLLA VVPRMPGHGT VPGALTAARW EQWLAATRLA VREARRQVPD GPLYLIGYSN GGALALRYSL AALEDERLAM PQRLVLISPM VGVTRYARYA GLAALPAVLP AFAKSAWMNV LPEFNPFKYN SFPVHAARQT YELTHEVQRA FDAAEADGRL QRLPPVLAFQ SLADSTVSTP AVVRDLFERL PANGSELVVF DINRSQAVSS LLRADMSSLL EQLLPPAERD YDLTVVGVAP ERGRAVEARR TAAGSLQAIS QPLGVDYPSQ LFSLSHVALP FPPSDPLYGS DPAPGEDYGV ALGTLAPRGE HGVLVVGLGS LQRVTSNPFY DYLRERIDED L
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