| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1509 |
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| Symbol | |
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| ID | 5108460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1668202 |
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| End bp | 1668954 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502738 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001187006 |
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| Protein GI | 146306541 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.805502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.135775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACG TCAATCTTCC CCTGAGCGGC CAGGTCGCCC TGGTTACCGG CGGATCGCGC
AGCATCGGCG CCGCCATCGC CAAACGCCTG GCCGCCGACG GAGCCAGTGT CGCCATCACC
TACAACGCCT CGCCGACCAA GGCCGAGGCA TTGGTCGGCG AGATAGTTGC CGCCGGTGGC
AGGGCAATGG CTATTGCCGC CGATGCGGGC GACCCGCAGG CGGTACGCAA CGCAGTACAG
AAGGTCGTCG GCACTTTCGG TCGGCTAGAC ATTCTGGTCA ACAACGCCGG CATCAGTGTA
CTCGGCGCCC CGGAGGAGAT CGCCTTCGAG GACTTCCAGC GCATTCTCGC GGTGAACGTG
ACCGGCGTGT TCGTTGCCAC CCAGGAGGCG CTAAAGCATA TGGGGCGCGG CGGGCGCATC
ATTCATATCG GCAGCTCCAT GGTGCATTAC GCCGCCTTTG CCACCGCCTC CGCCTACACC
CTGACCAAGG GCGCCTTGGC CGGTTTCAGT CGTGGGCTGG TGCGCGATCT CGGCCCGCGC
GGCATCACGG TCAATACCGT GCATCCAGGC CCGACCGACA GTGACATGAA CCCGGCGGAT
GGCCCTGTGG CCGATTTCGT CCGCCCCAAC ATTGCCGTCG GTCGCTACGG CGAGGGTCGT
GATATCGCGG CTGCCGTGGC CTGGCTGGCC AGCCCCGAGG CGGCCTTCGT CAGCGGCGCC
GAGCTGCTGG TAGACGGCGG TTTCACCGCC TGA
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| Protein sequence | MNNVNLPLSG QVALVTGGSR SIGAAIAKRL AADGASVAIT YNASPTKAEA LVGEIVAAGG
RAMAIAADAG DPQAVRNAVQ KVVGTFGRLD ILVNNAGISV LGAPEEIAFE DFQRILAVNV
TGVFVATQEA LKHMGRGGRI IHIGSSMVHY AAFATASAYT LTKGALAGFS RGLVRDLGPR
GITVNTVHPG PTDSDMNPAD GPVADFVRPN IAVGRYGEGR DIAAAVAWLA SPEAAFVSGA
ELLVDGGFTA
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