Gene Pmen_1498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1498 
Symbol 
ID5108449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1659640 
End bp1660542 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content66% 
IMG OID640502727 
Producthypothetical protein 
Protein accessionYP_001186995 
Protein GI146306530 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.378704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.625555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGGCT CCAACTCACG GCCGCTTCTG GCTCTGTCGC TCCTGTTCGT CATCGGCGCG 
CTCATGGGGC TGACCAGCAA TCTGGTGAAG CTGGCGGGCA ATGCCGGCTG GTCGCCGTTG
GCCTATCTGC TCTGGAGTCT GCTCGGCGGC GGCCTGCTGC TGTTGCTGTT CGCCTGGCTG
CGCGGCGAAC GCCCCGGTCT GGGGCCGCGC CTGCAACGCT ACTATCTGGC TTCGGGTCTG
CTCAGCATTG CCATACCCAA CGGCCTGCTG TTCAGTTCCA TCGGCCATGT CGGTGCCGGC
TTCGCCTCGA TGTGCCTCGC CTTTCCCCCG CTGATCACCT ATCTGCTGGC CCTGGCGCTA
CGCATGGAAG GGCTCAGCCG TATCCGCCTG CTGGGCATCT GCATCGGCCT GGCTGGCAGT
CTGCTGCTGG CGCTGGGCAA GCTGCATGCG GGCGACAGTC CGTCGCTGTG GGTTCTGGCC
GCTCTGTGCG TGCCGGTGTT TCTGGCGCTG GGCAACATCT ATCGTTCGCG CTATTGGCCA
CGCGGCGCCA GCCCGCTGTC GCTGGCGCCG GGCATGCTGC TTGGCGGCGC TCTGCTGCTG
GTACCCATGG CCCTGTTCGG CATCGACCTG GCACCGCGCC TGGACAGCAC GTCAGCGCTC
GTTCTGCTGG TCCTGCAGAT GCTGCTGTTC GCCATGATCT ACGCGCTGTT CTTCGTGCTG
CAGAAGCTGG CCGGCGCAGT GTTTCTCAGC CAGATCGGCT CGGTGGCCGC CATTGTCGGC
GCTGCCATCG CCATCGGTCT GCTGGGCGAG CGCGGCAGCC TGACCATGCT GCTGGCAGCC
TTGTGCATCG TCAGCGGCGT GCTGCTGGTG GCCTGGCGTG GGGCGAAGGA AGCACAAGCA
TGA
 
Protein sequence
MSGSNSRPLL ALSLLFVIGA LMGLTSNLVK LAGNAGWSPL AYLLWSLLGG GLLLLLFAWL 
RGERPGLGPR LQRYYLASGL LSIAIPNGLL FSSIGHVGAG FASMCLAFPP LITYLLALAL
RMEGLSRIRL LGICIGLAGS LLLALGKLHA GDSPSLWVLA ALCVPVFLAL GNIYRSRYWP
RGASPLSLAP GMLLGGALLL VPMALFGIDL APRLDSTSAL VLLVLQMLLF AMIYALFFVL
QKLAGAVFLS QIGSVAAIVG AAIAIGLLGE RGSLTMLLAA LCIVSGVLLV AWRGAKEAQA